RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
TPM4-209ENST00000588483 PXMP2Q9NR77 195 aa12.16□□□□□ -0.46
TPM4-209ENST00000588483 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
TPM4-209ENST00000588483 NID2Q14112 1375 aa12.16□□□□□ -0.46
TPM4-209ENST00000588483 FRMPD4Q14CM0 1322 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 CABYRO75952 493 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 CFBP00751 764 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 CDK7P50613 346 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
TPM4-209ENST00000588483 FSCN1Q16658 493 aaKnown RBP12.15□□□□□ -0.46
TPM4-209ENST00000588483 TRIM60Q495X7 471 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 SLC43A3Q8NBI5 491 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 RRP36Q96EU6 259 aaKnown RBP12.15□□□□□ -0.46
TPM4-209ENST00000588483 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 RMDN3Q96TC7 470 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 PDLIM7Q9NR12 457 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 RBM28Q9NW13 759 aaKnown RBP12.15□□□□□ -0.46
TPM4-209ENST00000588483 ZMYND8Q9ULU4 1186 aaPredicted RBP12.15□□□□□ -0.46
TPM4-209ENST00000588483 SNX14Q9Y5W7 946 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
TPM4-209ENST00000588483 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
TPM4-209ENST00000588483 SYN1P17600 705 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 MAGEA10P43363 369 aaPredicted RBP12.14□□□□□ -0.47
TPM4-209ENST00000588483 PPP2R5BQ15173 497 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 STXBP2Q15833 593 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 AP5M1Q9H0R1 490 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
TPM4-209ENST00000588483 ATP11BQ9Y2G3 1177 aa12.14□□□□□ -0.47
TPM4-209ENST00000588483 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 A6NJR5 290 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 GCOM1H8Y6P7 765 aaPredicted RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 ZEB2O60315 1214 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 SLC34A2O95436 690 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 NR3C2P08235 984 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 CLTBP09497 229 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 POLR2MP0CAP2 368 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 RXRAP19793 462 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 CPT1AP50416 773 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 FXR1P51114 621 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM4-209ENST00000588483 TLE2Q04725 743 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 FUT2Q10981 343 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 SYNE3Q6ZMZ3 975 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 MICU3Q86XE3 530 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 EMID1Q96A84 441 aaPredicted RBP12.13□□□□□ -0.47
TPM4-209ENST00000588483 TCEANC2Q96MN5 208 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
TPM4-209ENST00000588483 TRIM43BA6NCK2 446 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 ARVCFO00192 962 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 MEIS2O14770 477 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 KIAA0355O15063 1070 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 ZBTB43O43298 467 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 RGS20O76081 388 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 ARIH2O95376 493 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 EIF2AK2P19525 551 aaKnown RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 PTGS1P23219 599 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 RPS6KB1P23443 525 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 PSMA5P28066 241 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 HOXA13P31271 388 aaPredicted RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 EVCP57679 992 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 BEX3Q00994 111 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 PGM5Q15124 567 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 TRIM43Q96BQ3 446 aaPredicted RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
TPM4-209ENST00000588483 POLR3EQ9NVU0 708 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 PRKAG2Q9UGJ0 569 aa12.12□□□□□ -0.47
TPM4-209ENST00000588483 KLF18A0A0U1RQI7 1052 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 STAM2O75886 525 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 CD4P01730 458 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
TPM4-209ENST00000588483 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 RTN1Q16799 776 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 KCNV1Q6PIU1 500 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 CXCL17Q6UXB2 119 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
TPM4-209ENST00000588483 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
TPM4-209ENST00000588483 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
TPM4-209ENST00000588483 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms