RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PSEN1P49768 467 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 GHRHRQ02643 423 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 SNAPC2Q13487 334 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 PDIA5Q14554 519 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 CALCRLQ16602 461 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 TMEM266Q2M3C6 531 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 MOB2Q70IA6 237 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 GOLPH3LQ9H4A5 285 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 ZNF408Q9H9D4 720 aa11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
CHMP1B-202ENST00000588284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 WNT7AO00755 349 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 OPLAHO14841 1288 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 TBX3O15119 743 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 CIITAP33076 1130 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 ZNF76P36508 570 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 SREBF1P36956 1147 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 STAT3P40763 770 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 HSD17B4P51659 736 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 ARHGAP4P98171 946 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 SASS6Q6UVJ0 657 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 MBOAT7Q96N66 472 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 TSPY26PQ9H489 355 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 CCDC39Q9UFE4 941 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 DDX25Q9UHL0 483 aaKnown RBP11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
CHMP1B-202ENST00000588284 TRAF5O00463 557 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 CAVIN2O95810 425 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 UBA7P41226 1012 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 DGKZQ13574 1117 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 CAMK4Q16566 473 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 Q4G0T1 1027 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 KRBA2Q6ZNG9 492 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 IQUBQ8NA54 791 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 CNNM3Q8NE01 707 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 REPS2Q8NFH8 660 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 CLEC4DQ8WXI8 215 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 MTMR9Q96QG7 549 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 TEX13BQ9BXU2 312 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 CCSER1Q9C0I3 900 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 NMRK2Q9NPI5 230 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 FBXO40Q9UH90 709 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 MRVI1Q9Y6F6 885 aa11.88□□□□□ -0.51
CHMP1B-202ENST00000588284 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 STK25O00506 426 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 POLR2DO15514 142 aaKnown RBP11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 SLC26A4O43511 780 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 CELF2O95319 508 aaKnown RBP11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 CETPP11597 493 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 COPB2P35606 906 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 TXKP42681 527 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 MRE11P49959 708 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 GTF2A2P52657 109 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 GRIN1Q05586 938 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 LBX2Q6XYB7 198 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 CEP57L1Q8IYX8 460 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 CRYGNQ8WXF5 182 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 SYMPKQ92797 1274 aaKnown RBP11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
CHMP1B-202ENST00000588284 FSD2A1L4K1 749 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 EDIL3O43854 480 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 TDP2O95551 362 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 SLFN14P0C7P3 912 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 TECP42680 631 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 TMEM132BQ14DG7 1078 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 IL17AQ16552 155 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 SNRNP48Q6IEG0 339 aaKnown RBP11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 XRRA1Q6P2D8 792 aa11.86□□□□□ -0.51
CHMP1B-202ENST00000588284 EPSTI1Q96J88 318 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms