RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 NKX3-2P78367 333 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 STARD7Q9NQZ5 370 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 FBXO40Q9UH90 709 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 BRPF3Q9ULD4 1205 aa17.24■□□□□ 0.35
HDAC5-207ENST00000588261 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 MOXD2PA6NHM9 499 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 ASGR1P07306 291 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 RAG1P15918 1043 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 APOBRQ0VD83 1088 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 MYLIPQ8WY64 445 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
HDAC5-207ENST00000588261 TOX2Q96NM4 488 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
HDAC5-207ENST00000588261 GNEQ9Y223 722 aaKnown RBP17.23■□□□□ 0.35
HDAC5-207ENST00000588261 TTC28Q96AY4 2481 aa17.22■□□□□ 0.35
HDAC5-207ENST00000588261 GOLGA8BA8MQT2 603 aa17.22■□□□□ 0.35
HDAC5-207ENST00000588261 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
HDAC5-207ENST00000588261 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.355e-7■□□□□ 8.9
HDAC5-207ENST00000588261 BEX3Q00994 111 aa17.22■□□□□ 0.35
HDAC5-207ENST00000588261 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
HDAC5-207ENST00000588261 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
HDAC5-207ENST00000588261 GRIN2DO15399 1336 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 ALAS1P13196 640 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
HDAC5-207ENST00000588261 SLC16A2P36021 539 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 RTN1Q16799 776 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 TAPT1Q6NXT6 567 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
HDAC5-207ENST00000588261 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 TMEM39AQ9NV64 488 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 CYP39A1Q9NYL5 469 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
HDAC5-207ENST00000588261 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
HDAC5-207ENST00000588261 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.34
HDAC5-207ENST00000588261 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-207ENST00000588261 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-207ENST00000588261 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 SMPD1P17405 629 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 FPGSQ05932 587 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 SYDE2Q5VT97 1194 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
HDAC5-207ENST00000588261 PRDM6Q9NQX0 595 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
HDAC5-207ENST00000588261 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 ISY1Q9ULR0 285 aaKnown RBP17.2■□□□□ 0.34
HDAC5-207ENST00000588261 ELP1O95163 1332 aa17.2■□□□□ 0.34
HDAC5-207ENST00000588261 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
HDAC5-207ENST00000588261 PFKFB2O60825 505 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 TIMP1P01033 207 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 IKQ13123 557 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-207ENST00000588261 GNASQ5JWF2 1037 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
HDAC5-207ENST00000588261 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 SLC43A3Q8NBI5 491 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.19■□□□□ 0.341e-9■■■■□ 25.1
HDAC5-207ENST00000588261 RIOX1Q9H6W3 641 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
HDAC5-207ENST00000588261 ARVCFO00192 962 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 NFIBO00712 420 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 CD4P01730 458 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 ICAM1P05362 532 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 TKFCQ3LXA3 575 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 CXCL17Q6UXB2 119 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 CLEC4DQ8WXI8 215 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 GLT1D1Q96MS3 346 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
HDAC5-207ENST00000588261 FAM217BQ9NTX9 383 aaPredicted RBP17.18■□□□□ 0.34
HDAC5-207ENST00000588261 MROH7Q68CQ1 1323 aa17.18■□□□□ 0.34
HDAC5-207ENST00000588261 RXRAP19793 462 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 TNFAIP2Q03169 654 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 TRAF1Q13077 416 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
HDAC5-207ENST00000588261 TLK2Q86UE8 772 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
HDAC5-207ENST00000588261 SPTBN5Q9NRC6 3674 aaKnown RBP17.17■□□□□ 0.34
HDAC5-207ENST00000588261 CCPG1Q9ULG6 757 aa17.17■□□□□ 0.34
HDAC5-207ENST00000588261 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
HDAC5-207ENST00000588261 NCOR1O75376 2440 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms