RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LBX2Q6XYB7 198 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
CCDC43-203ENST00000588210 KCNH3Q9ULD8 1083 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 MYPNQ86TC9 1320 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 FLOT1O75955 427 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 RCAN1P53805 252 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 ISM2Q6H9L7 571 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 CNNM3Q8NE01 707 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
CCDC43-203ENST00000588210 DDX41Q9UJV9 622 aaKnown RBP16.55■□□□□ 0.24
CCDC43-203ENST00000588210 BMP3P12645 472 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 SLC1A4P43007 532 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 UBASH3AP57075 661 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC43-203ENST00000588210 SEC23AQ15436 765 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 FAM110CQ1W6H9 321 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
CCDC43-203ENST00000588210 ANKRD13CQ8N6S4 541 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
CCDC43-203ENST00000588210 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-203ENST00000588210 DSG3P32926 999 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 RTN1Q16799 776 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 VSTM4Q8IW00 320 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 TRIM22Q8IYM9 498 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 NUP88Q99567 741 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-203ENST00000588210 FOXP1Q9H334 677 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-203ENST00000588210 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
CCDC43-203ENST00000588210 SERPINC1P01008 464 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
CCDC43-203ENST00000588210 PNMA1Q8ND90 353 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 TMX1Q9H3N1 280 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 MORF4L1Q9UBU8 362 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 FEM1BQ9UK73 627 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 RABGAP1Q9Y3P9 1069 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
CCDC43-203ENST00000588210 PTPREP23469 700 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 TOB1P50616 345 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-203ENST00000588210 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-203ENST00000588210 MDM2Q00987 491 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-203ENST00000588210 WTAPQ15007 396 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-203ENST00000588210 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 PHLPP2Q6ZVD8 1323 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
CCDC43-203ENST00000588210 BTBD18B2RXH4 712 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 PLA2G6O60733 806 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 DEXIO95424 95 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 KIF22Q14807 665 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 MB21D1Q8N884 522 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 PRPF38AQ8NAV1 312 aaKnown RBP16.52■□□□□ 0.24
CCDC43-203ENST00000588210 GPRC5AQ8NFJ5 357 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 ADAMTS5Q9UNA0 930 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 MTMR7Q9Y216 660 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 RLFQ13129 1914 aa16.52■□□□□ 0.24
CCDC43-203ENST00000588210 CCDC196A0A1B0GTZ2 297 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 SNHG28P0DPA3 235 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 PDHBP11177 359 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 STAT2P52630 851 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 ARHGEF6Q15052 776 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 NT5DC1Q5TFE4 455 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 TMTC2Q8N394 836 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.23
CCDC43-203ENST00000588210 CHURC1Q8WUH1 139 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 TXNRD2Q9NNW7 524 aa16.52■□□□□ 0.23
CCDC43-203ENST00000588210 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.23
CCDC43-203ENST00000588210 TMEM232C9JQI7 657 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 BMP6P22004 513 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 ERVK-24P63145 666 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 ELF2Q15723 593 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 FAM160B2Q86V87 743 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 PAGR1Q9BTK6 254 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 FANCLQ9NW38 375 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 PARP14Q460N5 1801 aa16.51■□□□□ 0.23
CCDC43-203ENST00000588210 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
CCDC43-203ENST00000588210 POSTNQ15063 836 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 KCTD1Q719H9 257 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 TRIML1Q8N9V2 468 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 KCNJ14Q9UNX9 436 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 VWA5AO00534 786 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 CNMDO75829 334 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 FDX1P10109 184 aa16.5■□□□□ 0.23
CCDC43-203ENST00000588210 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
CCDC43-203ENST00000588210 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
CCDC43-203ENST00000588210 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms