RNA–Protein interactions for RNA: ENST00000587956.5

RANBP3-213, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-213ENST00000587956 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
RANBP3-213ENST00000587956 RMDN3Q96TC7 470 aa16.34■□□□□ 0.21
RANBP3-213ENST00000587956 TBX21Q9UL17 535 aa16.34■□□□□ 0.21
RANBP3-213ENST00000587956 Q9Y3F1 56 aa16.34■□□□□ 0.21
RANBP3-213ENST00000587956 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
RANBP3-213ENST00000587956 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
RANBP3-213ENST00000587956 SLC27A2O14975 620 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 PRC1O43663 620 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 CABYRO75952 493 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 ARIH2O95376 493 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 MYCLP12524 364 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-213ENST00000587956 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-213ENST00000587956 CYP2C18P33260 490 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-213ENST00000587956 CASC1Q6TDU7 716 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 RAB11FIP4Q86YS3 637 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
RANBP3-213ENST00000587956 SCFD2Q8WU76 684 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-213ENST00000587956 TRPV6Q9H1D0 765 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 DOCK5Q9H7D0 1870 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 SCN5AQ14524 2016 aa16.33■□□□□ 0.2
RANBP3-213ENST00000587956 OPLAHO14841 1288 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 SORBS3O60504 671 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 ACRP10323 421 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 CPT1AP50416 773 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 LY6KQ17RY6 165 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 FAM47CQ5HY64 1035 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 CREB3L3Q68CJ9 461 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 MFSD5Q6N075 450 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
RANBP3-213ENST00000587956 TRIP12Q14669 1992 aaPredicted RBP16.31■□□□□ 0.2
RANBP3-213ENST00000587956 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 GBF1Q92538 1859 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 CYTH3O43739 400 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 B4GALT4O60513 344 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 CD4P01730 458 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 CSF2RAP15509 400 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 RXRAP19793 462 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 CCL23P55773 120 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
RANBP3-213ENST00000587956 TROAPQ12815 778 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 STXBP2Q15833 593 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 SLC43A3Q8NBI5 491 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.23e-10■□□□□ 9.3
RANBP3-213ENST00000587956 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 MTMR10Q9NXD2 777 aa16.31■□□□□ 0.2
RANBP3-213ENST00000587956 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
RANBP3-213ENST00000587956 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■■■□□ 18.7
RANBP3-213ENST00000587956 BRDTQ58F21 947 aaPredicted RBP16.3■□□□□ 0.2
RANBP3-213ENST00000587956 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
RANBP3-213ENST00000587956 TMEM199Q8N511 208 aa16.3■□□□□ 0.2
RANBP3-213ENST00000587956 CTCFLQ8NI51 663 aaPredicted RBP16.3■□□□□ 0.2
RANBP3-213ENST00000587956 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
RANBP3-213ENST00000587956 HIPK3Q9H422 1215 aa16.3■□□□□ 0.2
RANBP3-213ENST00000587956 TRMT13Q9NUP7 481 aaKnown RBP16.3■□□□□ 0.2
RANBP3-213ENST00000587956 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
RANBP3-213ENST00000587956 NR3C2P08235 984 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 CYP2C9P11712 490 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 MCM5P33992 734 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 HSD17B4P51659 736 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.25e-7■■□□□ 12.9
RANBP3-213ENST00000587956 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
RANBP3-213ENST00000587956 AFG1LQ8WV93 481 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
RANBP3-213ENST00000587956 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
RANBP3-213ENST00000587956 PLEKHA8P1O95397 391 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 GH1P01241 217 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 CCDC62Q6P9F0 684 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 C16orf59Q7L2K0 433 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 IL31RAQ8NI17 732 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
RANBP3-213ENST00000587956 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 LAMA3Q16787 3333 aa16.28■□□□□ 0.2
RANBP3-213ENST00000587956 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 DDAH1O94760 285 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 MMP3P08254 477 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 KIF5BP33176 963 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 PGM5Q15124 567 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 TMEM240Q5SV17 173 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 ZNF365Q70YC5 407 aa16.27■□□□□ 0.2
RANBP3-213ENST00000587956 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms