RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 CNMDO75829 334 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 CETPP11597 493 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 NDUFA8P51970 172 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 HERVK_113P62684 666 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 MTMR9Q96QG7 549 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 HOMER2Q9NSB8 354 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 BTBD7Q9P203 1132 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 COL20A1Q9P218 1284 aa13.54□□□□□ -0.24
TNFRSF11A-203ENST00000587697 MGAMO43451 1857 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 VWA3AA6NCI4 1184 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 OSBPP22059 807 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 LONP1P36776 959 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 STAT3P40763 770 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 HUNKP57058 714 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 ZNF445P59923 1031 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 FCHSD1Q86WN1 690 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 LENG9Q96B70 501 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 EHMT1Q9H9B1 1298 aa13.53□□□□□ -0.24
TNFRSF11A-203ENST00000587697 MCM3APO60318 1980 aa13.52□□□□□ -0.24
TNFRSF11A-203ENST00000587697 CCL15-CCL14A0A0B4J2E2 113 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 RPS6P62753 249 aaKnown RBP13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CALCRLQ16602 461 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CCL15Q16663 113 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 Q4G0T1 1027 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SPECC1Q5M775 1068 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SLC30A10Q6XR72 485 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 RNF207Q6ZRF8 634 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CHST13Q8NET6 341 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TIGD1Q96MW7 591 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ACAD9Q9H845 621 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 KCNMB3Q9NPA1 279 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 RABGAP1Q9Y3P9 1069 aa13.52□□□□□ -0.25
TNFRSF11A-203ENST00000587697 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SYCE3A1L190 88 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FAM86B1E9PN63 330 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 KINO60870 393 aaKnown RBP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FAM86B2P0C5J1 330 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SYKP43405 635 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 GTF3C2Q8WUA4 911 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 HAS1Q92839 578 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SPATC1LQ9H0A9 340 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 RBPJLQ9UBG7 517 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 KCNH3Q9ULD8 1083 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
TNFRSF11A-203ENST00000587697 BTBD19C9JJ37 291 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TBX3O15119 743 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PEX10O60683 326 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ZNF202O95125 648 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 COPB2P35606 906 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 MKRN3Q13064 507 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PLS1Q14651 629 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 NSMFQ6X4W1 530 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 IGSF22Q8N9C0 903 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ETNPPLQ8TBG4 499 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 EPSTI1Q96J88 318 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 AK8Q96MA6 479 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TXNRD2Q9NNW7 524 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 A1CFQ9NQ94 594 aaKnown RBP13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FBXO40Q9UH90 709 aa13.5□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ARID2Q68CP9 1835 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 A0A087X0B3 334 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PDHXO00330 501 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CTAGE5O15320 804 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 SLC10A3P09131 477 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 RGMBQ6NW40 437 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ELOA2Q8IYF1 753 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 FAM43AQ8N2R8 423 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 IL31RAQ8NI17 732 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PAGR1Q9BTK6 254 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 CYP39A1Q9NYL5 469 aa13.49□□□□□ -0.25
TNFRSF11A-203ENST00000587697 PFASO15067 1338 aa13.48□□□□□ -0.25
TNFRSF11A-203ENST00000587697 ADGRA2Q96PE1 1338 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms