RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CCDC144CPQ8IYA2 1237 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 ZNF654Q8IZM8 581 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 SPICE1Q8N0Z3 855 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 PNMA1Q8ND90 353 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 TRPV1Q8NER1 839 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 GPRC5AQ8NFJ5 357 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 LPAR1Q92633 364 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 SNX27Q96L92 541 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 MTA3Q9BTC8 594 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 WDR18Q9BV38 432 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 SLC12A7Q9Y666 1083 aa9.81□□□□□ -0.84
NEDD4L-218ENST00000587547 GOLGA8BA8MQT2 603 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 MAPK4P31152 587 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 LIFRP42702 1097 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 EMP3P54852 163 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 HERVK_113P62684 666 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 ADGRE1Q14246 886 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 CCDC96Q2M329 555 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 ALYREFQ86V81 257 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 TMTC2Q8N394 836 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 MKL1Q969V6 931 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 TIFAQ96CG3 184 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 ALDH8A1Q9H2A2 487 aaPredicted RBP9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 PRDM12Q9H4Q4 367 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 EPHX3Q9H6B9 360 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 VCPKMTQ9H867 229 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 TMOD4Q9NZQ9 345 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 TMX2Q9Y320 296 aa9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 FRMPD2Q68DX3 1309 aaPredicted RBP9.8□□□□□ -0.84
NEDD4L-218ENST00000587547 GOLGA8AA7E2F4 631 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 F5H6K3 240 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 ZBTB43O43298 467 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 DDAH1O94760 285 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 LARGE1O95461 756 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 NDUFB10O96000 172 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 FDX1P10109 184 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 CNGA1P29973 690 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 NOVP48745 357 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 USP14P54578 494 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 BACE1P56817 501 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 ERVK-9P63128 1117 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 ERVK-24P63145 666 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 KLRC3Q07444 240 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 KIAA1755Q5JYT7 1200 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 MFSD14CQ5VZR4 134 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 ANO1Q5XXA6 986 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 APOA5Q6Q788 366 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 PLEKHH3Q7Z736 793 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 GAS2L1Q99501 681 aaPredicted RBP9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 NUP88Q99567 741 aaPredicted RBP9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 PAGR1Q9BTK6 254 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 TPCN1Q9ULQ1 816 aa9.79□□□□□ -0.84
NEDD4L-218ENST00000587547 TCF20Q9UGU0 1960 aaKnown RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 MSCO60682 206 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 AP1G2O75843 785 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 PARP1P09874 1014 aaKnown RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 GOLGA8HP0CJ92 632 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CALM1P0DP23 149 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CALM2P0DP24 149 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CALM3P0DP25 149 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 PDHBP11177 359 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CYP2C19P33261 490 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 SLC1A4P43007 532 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 METAP2P50579 478 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 TFF2Q03403 129 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 IKQ13123 557 aaPredicted RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 GRM4Q14833 912 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 RTN1Q16799 776 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 FAM83BQ5T0W9 1011 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 KCTD1Q719H9 257 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 HSCBQ8IWL3 235 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 FBXL16Q8N461 479 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 NECAB1Q8N987 351 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 GMCL1P1Q8NEA9 526 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 HLA-CQ95604 372 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 SLKQ9H2G2 1235 aaPredicted RBP9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 LIMCH1Q9UPQ0 1083 aa9.78□□□□□ -0.84
NEDD4L-218ENST00000587547 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms