RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.42
PPP6R1-204ENST00000587457 SRPRBQ9Y5M8 271 aaKnown RBP17.71■□□□□ 0.42
PPP6R1-204ENST00000587457 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 GPR75-ASB3A0A0A6YYF3 556 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 NAP1L1P55209 391 aaKnown RBP17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 DPYDQ12882 1025 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 SH2D3CQ8N5H7 860 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 RUFY1Q96T51 708 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 CENPHQ9H3R5 247 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 DMGDHQ9UI17 866 aaKnown RBP17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 CCDC88AQ3V6T2 1871 aa17.7■□□□□ 0.42
PPP6R1-204ENST00000587457 USP17L3A6NCW0 530 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 USP17L4A6NCW7 530 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 NPR1P16066 1061 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 SMTNP53814 917 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 MRPS25P82663 173 aaKnown RBP17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 ACTN3Q08043 901 aaPredicted RBP17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 KCTD16Q68DU8 428 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 TMC4Q7Z404 712 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 PAGE5Q96GU1 130 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 LRRC1Q9BTT6 524 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 A0A087X0B3 334 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 CCDC40Q4G0X9 1142 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 NAA35Q5VZE5 725 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 KIAA1328Q86T90 577 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 CNTNAP5Q8WYK1 1306 aa17.69■□□□□ 0.42
PPP6R1-204ENST00000587457 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 HSF2BPO75031 334 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 WLSQ5T9L3 541 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 ALS2CLQ60I27 953 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 IQCEQ6IPM2 695 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 YTHDF3Q7Z739 585 aaKnown RBP17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 TBC1D22AQ8WUA7 517 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 CABP5Q9NP86 173 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 TTC26A0AVF1 554 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 FAM205CA6NFA0 338 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 RASSF9O75901 435 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 XBP1P17861 261 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 LSP1P33241 339 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 RHBDL3P58872 404 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 SLC7A5Q01650 507 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 RILPL1Q5EBL4 403 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 EPN3Q9H201 632 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 ROBO3Q96MS0 1386 aa17.68■□□□□ 0.42
PPP6R1-204ENST00000587457 LAMB1P07942 1786 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 TSPY3P0CV98 308 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 TSPY8P0CW00 308 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 IDEP14735 1019 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 RXRBP28702 533 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 UBXN1Q04323 297 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 SF3B2Q13435 895 aaKnown RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 CEP85LQ5SZL2 805 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 CCDC13Q8IYE1 715 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 ZNF444Q8N0Y2 327 aaPredicted RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 MMGT1Q8N4V1 131 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 EPSTI1Q96J88 318 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 RNPC3Q96LT9 517 aaKnown RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 PHF20Q9BVI0 1012 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 FLT1P17948 1338 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 PPP1R12AO14974 1030 aaPredicted RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 KRT86O43790 486 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 GUCY1A3Q02108 690 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 NNTQ13423 1086 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 SH3RF1Q7Z6J0 888 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 FAXDC2Q96IV6 333 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 GSDMAQ96QA5 445 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 PAGR1Q9BTK6 254 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 MXD3Q9BW11 206 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 ZC3H12CQ9C0D7 883 aaKnown RBP17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 COA1Q9GZY4 146 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 LACRTQ9GZZ8 138 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 MTMR7Q9Y216 660 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 FAM205AQ6ZU69 1335 aa17.67■□□□□ 0.42
PPP6R1-204ENST00000587457 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 PDE6BP35913 854 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 IFT88Q13099 833 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 PNMA1Q8ND90 353 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 STAMQ92783 540 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 SLC40A1Q9NP59 571 aa17.66■□□□□ 0.42
PPP6R1-204ENST00000587457 GAKO14976 1311 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms