RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 OPLAHO14841 1288 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 SEPT4O43236 478 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 ST18O60284 1047 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 MSCO60682 206 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 PFKFB2O60825 505 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 CDKL5O76039 1030 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 CYBAP13498 195 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 SCG2P13521 617 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 CAPN2P17655 700 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 EN2P19622 333 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 GJA8P48165 433 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 ALDH5A1P51649 535 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 HSD17B4P51659 736 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 NAPAP54920 295 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 PDE4DQ08499 809 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 SCRN1Q12765 414 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 NBR1Q14596 966 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 PWP2Q15269 919 aaKnown RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 ME3Q16798 604 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 EEPD1Q7L9B9 569 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 ZNF713Q8N859 430 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 NECAB1Q8N987 351 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 TRPV1Q8NER1 839 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 U2AF1L4Q8WU68 220 aaKnown RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 GPKOWQ92917 476 aaPredicted RBP eCLIP7.54□□□□□ -1.2
NPC1-206ENST00000587223 FGD4Q96M96 766 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 TBC1D32Q96NH3 1257 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 RNF26Q9BY78 433 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 PAK6Q9NQU5 681 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 COL20A1Q9P218 1284 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 DDX20Q9UHI6 824 aaKnown RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 ZHX1Q9UKY1 873 aaPredicted RBP7.54□□□□□ -1.2
NPC1-206ENST00000587223 FAM184BQ9ULE4 1060 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 LIMCH1Q9UPQ0 1083 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 ZNF236Q9UL36 1845 aa7.54□□□□□ -1.2
NPC1-206ENST00000587223 STXBP3O00186 592 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 ZNF865P0CJ78 1059 aaPredicted RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 MYCLP12524 364 aaPredicted RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 AKR1A1P14550 325 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 GHRHRQ02643 423 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 PKN1Q16512 942 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 CCDC144BQ3MJ40 725 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 IFFO2Q5TF58 517 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 ANO1Q5XXA6 986 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 WWC2Q6AWC2 1192 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 IQSEC1Q6DN90 963 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 USP17L6PQ6QN14 398 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 POTEHQ6S545 545 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 MORC4Q8TE76 937 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 ZSCAN31Q96LW9 406 aaPredicted RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 IWS1Q96ST2 819 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 GLT8D2Q9H1C3 349 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 PXMP2Q9NR77 195 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 BARHL2Q9NY43 387 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
NPC1-206ENST00000587223 NID2Q14112 1375 aa7.53□□□□□ -1.2
NPC1-206ENST00000587223 ASTN1O14525 1302 aa7.52□□□□□ -1.2
NPC1-206ENST00000587223 MCM3APO60318 1980 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 SPDYE3A6NKU9 549 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 MEIS2O14770 477 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
NPC1-206ENST00000587223 DEXIO95424 95 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 NR3C2P08235 984 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 RARBP10826 455 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 GNA11P29992 359 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 ADCY7P51828 1080 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 NLRP5P59047 1200 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 TNFAIP2Q03169 654 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 STXBP2Q15833 593 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 LHX8Q68G74 356 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 PPP1R18Q6NYC8 613 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 FBXO16Q8IX29 292 aaPredicted RBP7.52□□□□□ -1.21
NPC1-206ENST00000587223 ARRDC4Q8NCT1 418 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 CCDC148Q8NFR7 591 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 GTF3C6Q969F1 213 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 CRISPLD2Q9H0B8 497 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 C6orf50Q9HD87 102 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 VTA1Q9NP79 307 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 RIC8AQ9NPQ8 531 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 PDGFCQ9NRA1 345 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 SH2B1Q9NRF2 756 aaPredicted RBP7.52□□□□□ -1.21
NPC1-206ENST00000587223 ORC3Q9UBD5 711 aaPredicted RBP7.52□□□□□ -1.21
NPC1-206ENST00000587223 OGDHLQ9ULD0 1010 aa7.52□□□□□ -1.21
NPC1-206ENST00000587223 DYNC1LI2O43237 492 aaPredicted RBP7.51□□□□□ -1.21
NPC1-206ENST00000587223 DTNBO60941 627 aa7.51□□□□□ -1.21
NPC1-206ENST00000587223 DUSP11O75319 330 aaKnown RBP7.51□□□□□ -1.21
NPC1-206ENST00000587223 LARGE1O95461 756 aa7.51□□□□□ -1.21
NPC1-206ENST00000587223 FOSP01100 380 aaPredicted RBP7.51□□□□□ -1.21
NPC1-206ENST00000587223 XBP1P17861 261 aa7.51□□□□□ -1.21
NPC1-206ENST00000587223 EDNRBP24530 442 aa7.51□□□□□ -1.21
NPC1-206ENST00000587223 CCND2P30279 289 aa7.51□□□□□ -1.21
NPC1-206ENST00000587223 ADCYAP1R1P41586 468 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms