RNA–Protein interactions for RNA: ENST00000587175.1

CACTIN-205, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 5

Gene CACTIN, Length 2,216 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-205ENST00000587175 ARFGEF1Q9Y6D6 1849 aa23.18■■□□□ 1.3
CACTIN-205ENST00000587175 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
CACTIN-205ENST00000587175 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 MARCH6O60337 910 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 AOC3Q16853 763 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 CNNM4Q6P4Q7 775 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 MKL1Q969V6 931 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 GLT8D2Q9H1C3 349 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 PES1O00541 588 aaKnown RBP23.17■■□□□ 1.3
CACTIN-205ENST00000587175 NPM3O75607 178 aaKnown RBP23.17■■□□□ 1.3
CACTIN-205ENST00000587175 FXR1P51114 621 aaKnown RBP eCLIP23.17■■□□□ 1.3
CACTIN-205ENST00000587175 GRB10Q13322 594 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 KRT79Q5XKE5 535 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 SLFN13Q68D06 897 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 RABGGTAQ92696 567 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 DDX25Q9UHL0 483 aaKnown RBP23.17■■□□□ 1.3
CACTIN-205ENST00000587175 ADGRG1Q9Y653 693 aa23.17■■□□□ 1.3
CACTIN-205ENST00000587175 TEX35Q5T0J7 233 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 IRF2BP1Q8IU81 584 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 NAP1L4Q99733 375 aaKnown RBP23.16■■□□□ 1.3
CACTIN-205ENST00000587175 CCNE1P24864 410 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 TTI2Q6NXR4 508 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 CC2D1AQ6P1N0 951 aaPredicted RBP23.16■■□□□ 1.3
CACTIN-205ENST00000587175 RAD9BQ6WBX8 426 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 CSGALNACT2Q8N6G5 542 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 SNX29Q8TEQ0 813 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 LARP4BQ92615 738 aaKnown RBP23.16■■□□□ 1.3
CACTIN-205ENST00000587175 GOLGA1Q92805 767 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 P2RX5Q93086 422 aa23.16■■□□□ 1.3
CACTIN-205ENST00000587175 POTEMA6NI47 508 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 EDIL3O43854 480 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 SEC31AO94979 1220 aaKnown RBP23.15■■□□□ 1.3
CACTIN-205ENST00000587175 GCFC2P16383 781 aaKnown RBP23.15■■□□□ 1.3
CACTIN-205ENST00000587175 ICA1Q05084 483 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 QRICH1Q2TAL8 776 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 TATDN1Q6P1N9 297 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 TMEM179Q6ZVK1 233 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 SH3BP5LQ7L8J4 393 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 EPC1Q9H2F5 836 aa23.15■■□□□ 1.3
CACTIN-205ENST00000587175 STK4Q13043 487 aa23.14■■□□□ 1.3
CACTIN-205ENST00000587175 SEPT2Q15019 361 aa23.14■■□□□ 1.3
CACTIN-205ENST00000587175 FAM114A1Q8IWE2 563 aa23.14■■□□□ 1.3
CACTIN-205ENST00000587175 PNMA5Q96PV4 448 aa23.14■■□□□ 1.3
CACTIN-205ENST00000587175 ABHD10Q9NUJ1 306 aa23.14■■□□□ 1.3
CACTIN-205ENST00000587175 LGALS16A8MUM7 142 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 MCM6Q14566 821 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 BLOC1S4Q9NUP1 217 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 PCDHA1Q9Y5I3 950 aa23.14■■□□□ 1.29
CACTIN-205ENST00000587175 CCDC66A2RUB6 948 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 FCER1AP12319 257 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 RXRBP28702 533 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 CDC37Q16543 378 aaPredicted RBP23.13■■□□□ 1.29
CACTIN-205ENST00000587175 ABCB5Q2M3G0 1257 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 SHROOM1Q2M3G4 852 aaPredicted RBP23.13■■□□□ 1.29
CACTIN-205ENST00000587175 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
CACTIN-205ENST00000587175 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 LRRC27Q9C0I9 530 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 TDRD3Q9H7E2 651 aaKnown RBP23.13■■□□□ 1.29
CACTIN-205ENST00000587175 LZTFL1Q9NQ48 299 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 KIF5CO60282 957 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 TBC1D8O95759 1140 aa23.13■■□□□ 1.29
CACTIN-205ENST00000587175 IRX2Q9BZI1 471 aaPredicted RBP23.13■■□□□ 1.29
CACTIN-205ENST00000587175 GDF11O95390 407 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 FECHP22830 423 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 CC2D2BQ6DHV5 1058 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 UNC13DQ70J99 1090 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 RAD54LQ92698 747 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 DUSP9Q99956 384 aaKnown RBP23.12■■□□□ 1.29
CACTIN-205ENST00000587175 PARD6BQ9BYG5 372 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 ARFGAP3Q9NP61 516 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 PVALEFA0A1B0GWK0 134 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 A0A1W2PQC6 194 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 KRT9P35527 623 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 COBLL1Q53SF7 1204 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 ANKRD40Q6AI12 368 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 CYP26C1Q6V0L0 522 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 UBXN6Q9BZV1 441 aa23.12■■□□□ 1.29
CACTIN-205ENST00000587175 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
CACTIN-205ENST00000587175 MYMKA6NI61 221 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 PPIP5K2O43314 1243 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 ENTPD3O75355 529 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 DNM2P50570 870 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 TUBGCP2Q9BSJ2 902 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 SLC39A2Q9NP94 309 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 PCDHA12Q9UN75 941 aa23.11■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L15C9J2P7 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L13C9JLJ4 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L11C9JVI0 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L18D6R9N7 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L22D6RA61 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L17D6RBQ6 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L19D6RCP7 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L20D6RJB6 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 SASH3O75995 380 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L24Q0WX57 530 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 IKQ13123 557 aaPredicted RBP23.1■■□□□ 1.29
CACTIN-205ENST00000587175 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
CACTIN-205ENST00000587175 USP17L6PQ6QN14 398 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms