RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 SNX29Q8TEQ0 813 aa33.5■■■□□ 2.95
H3F3B-203ENST00000586518 C7orf25Q9BPX7 421 aa33.5■■■□□ 2.95
H3F3B-203ENST00000586518 MMTAG2Q9BU76 263 aaKnown RBP33.5■■■□□ 2.95
H3F3B-203ENST00000586518 AS3MTQ9HBK9 375 aa33.5■■■□□ 2.95
H3F3B-203ENST00000586518 KDM3AQ9Y4C1 1321 aa33.49■■■□□ 2.95
H3F3B-203ENST00000586518 ATP1A3P13637 1013 aa33.49■■■□□ 2.95
H3F3B-203ENST00000586518 Q4G0T1 1027 aa33.49■■■□□ 2.95
H3F3B-203ENST00000586518 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.49■■■□□ 2.95
H3F3B-203ENST00000586518 SCAF8Q9UPN6 1271 aaKnown RBP33.49■■■□□ 2.95
H3F3B-203ENST00000586518 PPP1R2P41236 205 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 FILIP1Q7Z7B0 1213 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 HAS1Q92839 578 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 NT5C3AQ9H0P0 336 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 PNMA2Q9UL42 364 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 NBPF12Q5TAG4 269 aaPredicted RBP33.48■■■□□ 2.95
H3F3B-203ENST00000586518 ANGEL2Q5VTE6 544 aaKnown RBP33.48■■■□□ 2.95
H3F3B-203ENST00000586518 PRPF38AQ8NAV1 312 aaKnown RBP33.48■■■□□ 2.95
H3F3B-203ENST00000586518 CRYGNQ8WXF5 182 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 GLIS2Q9BZE0 524 aaPredicted RBP33.48■■■□□ 2.95
H3F3B-203ENST00000586518 KCNF1Q9H3M0 494 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 KCNMB3Q9NPA1 279 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 RWDD2AQ9UIY3 292 aa33.48■■■□□ 2.95
H3F3B-203ENST00000586518 NRDCO43847 1150 aa33.47■■■□□ 2.95
H3F3B-203ENST00000586518 CYP3A4P08684 503 aa33.47■■■□□ 2.95
H3F3B-203ENST00000586518 HOXA7P31268 230 aaPredicted RBP33.47■■■□□ 2.95
H3F3B-203ENST00000586518 ZNF76P36508 570 aa33.47■■■□□ 2.95
H3F3B-203ENST00000586518 TRMT44Q8IYL2 757 aaKnown RBP33.47■■■□□ 2.95
H3F3B-203ENST00000586518 ASTN2O75129 1339 aaPredicted RBP33.46■■■□□ 2.95
H3F3B-203ENST00000586518 RHOBTB3O94955 611 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 ZNF18P17022 549 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 CIITAP33076 1130 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 GRB10Q13322 594 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 TMC6Q7Z403 805 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 SLF1Q9BQI6 1058 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 PICK1Q9NRD5 415 aa33.46■■■□□ 2.95
H3F3B-203ENST00000586518 CD44P16070 742 aaKnown RBP33.45■■■□□ 2.95
H3F3B-203ENST00000586518 PAK1Q13153 545 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 KMT5BQ4FZB7 885 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 CCDC150Q8NCX0 1101 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 LARP4BQ92615 738 aaKnown RBP33.45■■■□□ 2.95
H3F3B-203ENST00000586518 FAM20AQ96MK3 541 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 CTAGE1Q96RT6 745 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 EXOC1Q9NV70 894 aa33.45■■■□□ 2.95
H3F3B-203ENST00000586518 POTEMA6NI47 508 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 CFBP00751 764 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 CCDC144BQ3MJ40 725 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 ERMNQ8TAM6 284 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 TRIM9Q9C026 710 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 ZNF112Q9UJU3 913 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 CTNND2Q9UQB3 1225 aa33.45■■■□□ 2.94
H3F3B-203ENST00000586518 CTDP1Q9Y5B0 961 aaPredicted RBP33.45■■■□□ 2.94
H3F3B-203ENST00000586518 DICER1Q9UPY3 1922 aaKnown RBP33.44■■■□□ 2.94
H3F3B-203ENST00000586518 ASIC1P78348 528 aa33.44■■■□□ 2.94
H3F3B-203ENST00000586518 SAMD1Q6SPF0 538 aaPredicted RBP33.44■■■□□ 2.94
H3F3B-203ENST00000586518 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.44■■■□□ 2.94
H3F3B-203ENST00000586518 CCDC84Q86UT8 332 aaPredicted RBP33.44■■■□□ 2.94
H3F3B-203ENST00000586518 LRRC8AQ8IWT6 810 aa33.44■■■□□ 2.94
H3F3B-203ENST00000586518 SCYL3Q8IZE3 742 aa33.44■■■□□ 2.94
H3F3B-203ENST00000586518 OPLAHO14841 1288 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 ICAM1P05362 532 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 HOXA13P31271 388 aaPredicted RBP33.43■■■□□ 2.94
H3F3B-203ENST00000586518 PRR16Q569H4 304 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 LDHDQ86WU2 507 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 SMYD4Q8IYR2 804 aaPredicted RBP33.43■■■□□ 2.94
H3F3B-203ENST00000586518 ANKRD20A12PQ8NF67 263 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 PNMA5Q96PV4 448 aa33.43■■■□□ 2.94
H3F3B-203ENST00000586518 FDX1P10109 184 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 STX17P56962 302 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 TMEM119Q4V9L6 283 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 FCHSD1Q86WN1 690 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 KIAA1524Q8TCG1 905 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 RAD54LQ92698 747 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 WDR18Q9BV38 432 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 RABGAP1Q9Y3P9 1069 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 KLRC4O43908 158 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 CCT6AP40227 531 aaKnown RBP33.42■■■□□ 2.94
H3F3B-203ENST00000586518 SPAG1Q07617 926 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 NOLC1Q14978 699 aaKnown RBP eCLIP33.42■■■□□ 2.947e-17■□□□□ 11.2
H3F3B-203ENST00000586518 SUPT20HL1Q3ZLR7 823 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 HAUS3Q68CZ6 603 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 NELFBQ8WX92 580 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 FBXO28Q9NVF7 368 aa33.42■■■□□ 2.94
H3F3B-203ENST00000586518 FILIP1LQ4L180 1135 aa33.41■■■□□ 2.94
H3F3B-203ENST00000586518 HYIQ5T013 277 aa33.41■■■□□ 2.94
H3F3B-203ENST00000586518 CNNM4Q6P4Q7 775 aa33.41■■■□□ 2.94
H3F3B-203ENST00000586518 MCF2L2Q86YR7 1114 aa33.41■■■□□ 2.94
H3F3B-203ENST00000586518 GIMAP8Q8ND71 665 aaPredicted RBP33.41■■■□□ 2.94
H3F3B-203ENST00000586518 CACTINQ8WUQ7 758 aaKnown RBP33.41■■■□□ 2.94
H3F3B-203ENST00000586518 CCPG1Q9ULG6 757 aa33.41■■■□□ 2.94
H3F3B-203ENST00000586518 PVALEFA0A1B0GWK0 134 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 PSMA7O14818 248 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 INPP5BP32019 993 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 ADSSL1Q8N142 457 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 TRPM4Q8TD43 1214 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 TANGO6Q9C0B7 1094 aa33.4■■■□□ 2.94
H3F3B-203ENST00000586518 FHDC1Q9C0D6 1143 aaPredicted RBP33.4■■■□□ 2.94
H3F3B-203ENST00000586518 SAMSN1Q9NSI8 373 aaKnown RBP33.4■■■□□ 2.94
H3F3B-203ENST00000586518 BMP2KQ9NSY1 1161 aaPredicted RBP33.4■■■□□ 2.94
H3F3B-203ENST00000586518 PDE4DQ08499 809 aa33.39■■■□□ 2.94
H3F3B-203ENST00000586518 MED15Q96RN5 788 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms