RNA–Protein interactions for RNA: ENST00000585844.1

CCDC130-203, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-203ENST00000585844 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
CCDC130-203ENST00000585844 COL4A4P53420 1690 aaPredicted RBP18.85■□□□□ 0.61
CCDC130-203ENST00000585844 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
CCDC130-203ENST00000585844 LPXNO60711 386 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 GPR37L1O60883 481 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 CALML3P27482 149 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 SYDE2Q5VT97 1194 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 CCDC155Q8N6L0 562 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 DNERQ8NFT8 737 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 PPP1R13LQ8WUF5 828 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 LMCD1Q9NZU5 365 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 PNMA2Q9UL42 364 aa18.85■□□□□ 0.61
CCDC130-203ENST00000585844 EDNRBP24530 442 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 AFAP1L1Q8TED9 768 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 CLEC4DQ8WXI8 215 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 ANAPC4Q9UJX5 808 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
CCDC130-203ENST00000585844 B4DLN1 442 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 FOXP2O15409 715 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 TXNP10599 105 aaKnown RBP18.83■□□□□ 0.6
CCDC130-203ENST00000585844 MRPL12P52815 198 aaKnown RBP18.83■□□□□ 0.6
CCDC130-203ENST00000585844 PTGISQ16647 500 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 SPRED2Q7Z698 418 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 PI4K2BQ8TCG2 481 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 COPS5Q92905 334 aa18.83■□□□□ 0.6
CCDC130-203ENST00000585844 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
CCDC130-203ENST00000585844 ORC4O43929 436 aa18.82■□□□□ 0.6
CCDC130-203ENST00000585844 TOP1P11387 765 aaKnown RBP18.82■□□□□ 0.6
CCDC130-203ENST00000585844 WDR5P61964 334 aaKnown RBP18.82■□□□□ 0.6
CCDC130-203ENST00000585844 RPS6P62753 249 aaKnown RBP18.82■□□□□ 0.6
CCDC130-203ENST00000585844 KHSRPQ92945 711 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC130-203ENST00000585844 ZBED2Q9BTP6 218 aa18.82■□□□□ 0.6
CCDC130-203ENST00000585844 GPCPD1Q9NPB8 672 aa18.82■□□□□ 0.6
CCDC130-203ENST00000585844 C11orf16Q9NQ32 467 aa18.82■□□□□ 0.6
CCDC130-203ENST00000585844 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 PI4K2BG5E9Z4 385 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 PARNO95453 639 aaKnown RBP18.81■□□□□ 0.6
CCDC130-203ENST00000585844 FGRP09769 529 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 C20orf194Q5TEA3 1177 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 SESTD1Q86VW0 696 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 TET1Q8NFU7 2136 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 TMEM47Q9BQJ4 181 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 RCAN3Q9UKA8 241 aa18.81■□□□□ 0.6
CCDC130-203ENST00000585844 WDR19Q8NEZ3 1342 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 SELPP16109 830 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 CHMP4BP1P59074 171 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 GPNMBQ14956 572 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 CNKSR3Q6P9H4 555 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 GDPD5Q8WTR4 605 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 CTAGE1Q96RT6 745 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
CCDC130-203ENST00000585844 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-203ENST00000585844 ARIH2O95376 493 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 PDHBP11177 359 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 DEFB103AP81534 67 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 RBL2Q08999 1139 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 GDF6Q6KF10 455 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-203ENST00000585844 TMCO2Q7Z6W1 182 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-203ENST00000585844 RAD9AQ99638 391 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 CD320Q9NPF0 282 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 TOMM22Q9NS69 142 aa18.79■□□□□ 0.6
CCDC130-203ENST00000585844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.78■□□□□ 0.6
CCDC130-203ENST00000585844 ABHD14A-ACY1A0A1B0GW23 586 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 FAM86C2PA6NEL3 165 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 GJB5O95377 273 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 CXCL10P02778 98 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 MMP3P08254 477 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 ERVK-21P61565 698 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 VPS53Q5VIR6 699 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 CCDC62Q6P9F0 684 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 MIER1Q8N108 512 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 AFG1LQ8WV93 481 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 TGS1Q96RS0 853 aaKnown RBP18.78■□□□□ 0.6
CCDC130-203ENST00000585844 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
CCDC130-203ENST00000585844 SUGCTQ9HAC7 445 aa18.78■□□□□ 0.6
CCDC130-203ENST00000585844 EFCAB14O75071 495 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 GH1P01241 217 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 CASTP20810 708 aaKnown RBP18.77■□□□□ 0.6
CCDC130-203ENST00000585844 ZNF543Q08ER8 600 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 ALX1Q15699 326 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 DHX38Q92620 1227 aaKnown RBP18.77■□□□□ 0.6
CCDC130-203ENST00000585844 KAT2BQ92831 832 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 MAF1Q9H063 256 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 MTUS1Q9ULD2 1270 aa18.77■□□□□ 0.6
CCDC130-203ENST00000585844 SIP14410 1827 aa18.77■□□□□ 0.59
CCDC130-203ENST00000585844 LINC01553A4QN01 128 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 NBNO60934 754 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 CKBP12277 381 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 IKBKEQ14164 716 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 LEXMQ3ZCV2 418 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
CCDC130-203ENST00000585844 OTUD7AQ8TE49 926 aaPredicted RBP18.76■□□□□ 0.59
CCDC130-203ENST00000585844 TTC14Q96N46 770 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 GTF2IRD1Q9UHL9 959 aa18.76■□□□□ 0.59
CCDC130-203ENST00000585844 PRR33A8MZF0 331 aa18.75■□□□□ 0.59
CCDC130-203ENST00000585844 SNHG28P0DPA3 235 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms