RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 DPF2Q92785 391 aa12.65□□□□□ -0.38
LIG3-204ENST00000585740 MBOAT7Q96N66 472 aa12.65□□□□□ -0.38
LIG3-204ENST00000585740 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
LIG3-204ENST00000585740 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 PSMA7O14818 248 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 TBX3O15119 743 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 SLC37A4O43826 429 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 KLRC4O43908 158 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 TUBB4AP04350 444 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 CDC25AP30304 524 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 STAT2P52630 851 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 ZNF280AP59817 542 aaPredicted RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 NR1I3Q14994 352 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 KMT5BQ4FZB7 885 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 SPECC1LQ69YQ0 1117 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 CNNM4Q6P4Q7 775 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 SLFN12Q8IYM2 578 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 ADSSL1Q8N142 457 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 C17orf53Q8N3J3 647 aaPredicted RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 NELFBQ8WX92 580 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 DHTKD1Q96HY7 919 aaPredicted RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 TRIM9Q9C026 710 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 SAMSN1Q9NSI8 373 aaKnown RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
LIG3-204ENST00000585740 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
LIG3-204ENST00000585740 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
LIG3-204ENST00000585740 PVALEFA0A1B0GWK0 134 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 EDIL3O43854 480 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 ASNSP08243 561 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 LMNB1P20700 586 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 CAP2P40123 477 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 STX17P56962 302 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 TBX2Q13207 712 aaPredicted RBP12.63□□□□□ -0.39
LIG3-204ENST00000585740 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
LIG3-204ENST00000585740 SHROOM1Q2M3G4 852 aaPredicted RBP12.63□□□□□ -0.39
LIG3-204ENST00000585740 TMEM119Q4V9L6 283 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 HYIQ5T013 277 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
LIG3-204ENST00000585740 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 MED15Q96RN5 788 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 PRR12Q9ULL5 1215 aa12.63□□□□□ -0.39
LIG3-204ENST00000585740 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 WNT10BO00744 389 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 MEIS2O14770 477 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 TPM1P09493 284 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 PRCPP42785 496 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 ASIC1P78348 528 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 JAG1P78504 1218 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 PSMD2Q13200 908 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 GRB10Q13322 594 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 ARID5BQ14865 1188 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 Q4G0T1 1027 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 UNC13DQ70J99 1090 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
LIG3-204ENST00000585740 LARP4BQ92615 738 aaKnown RBP12.62□□□□□ -0.39
LIG3-204ENST00000585740 RAD54LQ92698 747 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 NUP88Q99567 741 aaPredicted RBP12.62□□□□□ -0.39
LIG3-204ENST00000585740 THAP9Q9H5L6 903 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 ADD3Q9UEY8 706 aaKnown RBP12.62□□□□□ -0.39
LIG3-204ENST00000585740 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 PCDHA12Q9UN75 941 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 MRPL11Q9Y3B7 192 aaKnown RBP12.62□□□□□ -0.39
LIG3-204ENST00000585740 ABCB11O95342 1321 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
LIG3-204ENST00000585740 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 CYP3A4P08684 503 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 CCNE1P24864 410 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 CIITAP33076 1130 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 SREBF1P36956 1147 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 PDE4DQ08499 809 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 TRIM14Q14142 442 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 PPFIBP1Q86W92 1011 aa12.61□□□□□ -0.39
LIG3-204ENST00000585740 CCAR2Q8N163 923 aaKnown RBP12.61□□□□□ -0.39
LIG3-204ENST00000585740 KCTD17Q8N5Z5 321 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms