RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 KCNJ6P48051 423 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 TTBK2Q6IQ55 1244 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 WDR19Q8NEZ3 1342 aa12.59□□□□□ -0.39
CSNK1D-226ENST00000585026 NCOR1O75376 2440 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 A6NJR5 290 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 PARNO95453 639 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 IQCF3P0C7M6 154 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 TXNP10599 105 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 BMP1P13497 986 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 NT5C2P49902 561 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 GPATCH4Q5T3I0 446 aaKnown RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 ANKRD45Q5TZF3 282 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 CAGE1Q8TC20 777 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 OTUD7AQ8TE49 926 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 PRUNE2Q8WUY3 3088 aa12.58□□□□□ -0.4
CSNK1D-226ENST00000585026 PDHBP11177 359 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 EDNRBP24530 442 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 MCMDC2Q4G0Z9 681 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 RASGRP2Q7LDG7 609 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 CLEC4DQ8WXI8 215 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 ARNTL2Q8WYA1 636 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 EYSQ5T1H1 3165 aa12.57□□□□□ -0.4
CSNK1D-226ENST00000585026 TLL1O43897 1013 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 FGAP02671 866 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 PDE4AP27815 886 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 MFAP1P55081 439 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 PTGISQ16647 500 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 MFSD6Q6ZSS7 791 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 HLA-CQ95604 372 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 VWCEQ96DN2 955 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 CERS4Q9HA82 394 aa12.56□□□□□ -0.4
CSNK1D-226ENST00000585026 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 FOXP2O15409 715 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 EFCAB14O75071 495 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 GH1P01241 217 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 TFF2Q03403 129 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 TAP1Q03518 808 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 ESR2Q92731 530 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 LMCD1Q9NZU5 365 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
CSNK1D-226ENST00000585026 RFXAPO00287 272 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 SELPP16109 830 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 PLA2G5P39877 138 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 STXBP2Q15833 593 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 USH1GQ495M9 461 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 SKAP1Q86WV1 359 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 COPS5Q92905 334 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 IWS1Q96ST2 819 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 KATNAL1Q9BW62 490 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 ABCB11O95342 1321 aa12.54□□□□□ -0.4
CSNK1D-226ENST00000585026 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 MMP3P08254 477 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 KCNQ1P51787 676 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 PDE1AP54750 535 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 DGKDQ16760 1214 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 CNKSR3Q6P9H4 555 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 LRRC8DQ7L1W4 858 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 AFG1LQ8WV93 481 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 NECAB3Q96P71 396 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 MRPL11Q9Y3B7 192 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-226ENST00000585026 LRRC37A2A6NM11 1700 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 HAND2P61296 217 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 RBL2Q08999 1139 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 GRB10Q13322 594 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 IKBKEQ14164 716 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
CSNK1D-226ENST00000585026 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms