RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 HERVK_113Q902F9 699 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 KIF1BPQ96EK5 621 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 SLF1Q9BQI6 1058 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.39□□□□□ -1.39
VAPA-207ENST00000583879 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 PAG1Q9NWQ8 432 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 NYAP2Q9P242 653 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 SLC4A4Q9Y6R1 1079 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 LTBP2Q14767 1821 aa6.39□□□□□ -1.39
VAPA-207ENST00000583879 RLFQ13129 1914 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CUL9Q8IWT3 2517 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 APBB1O00213 710 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CTAGE5O15320 804 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 ADCY6O43306 1168 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 ZBED4O75132 1171 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CD4P01730 458 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CHGBP05060 677 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 ATP5JP18859 108 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CYP2C18P33260 490 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 RAB30Q15771 203 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 PTCRAQ6ISU1 281 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 PSRC1Q6PGN9 363 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 RETREG3Q86VR2 466 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 RPAP2Q8IXW5 612 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 ANKRD35Q8N283 1001 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 SLC43A3Q8NBI5 491 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 ADAMTS19Q8TE59 1207 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 FGD4Q96M96 766 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 ZFP42Q96MM3 310 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 NUP88Q99567 741 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 HAUS7Q99871 368 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 PPP1R12CQ9BZL4 782 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 PUS7LQ9H0K6 701 aaKnown RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 UPF3AQ9H1J1 476 aaKnown RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 MTIF3Q9H2K0 278 aaKnown RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 SLC28A3Q9HAS3 691 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 MKNK2Q9HBH9 465 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 IL23AQ9NPF7 189 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CXXC1Q9P0U4 656 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 THEGQ9P2T0 379 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 CTDP1Q9Y5B0 961 aaPredicted RBP6.38□□□□□ -1.39
VAPA-207ENST00000583879 ZNF236Q9UL36 1845 aa6.38□□□□□ -1.39
VAPA-207ENST00000583879 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 FOCADQ5VW36 1801 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 ZBED9Q6R2W3 1325 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 CABYRO75952 493 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 NDUFB10O96000 172 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 OAZ1P54368 228 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 GUCA2AQ02747 115 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 TNFAIP2Q03169 654 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 ITGA7Q13683 1181 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 SBK1Q52WX2 424 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 ZSCAN25Q6NSZ9 544 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 CXCL17Q6UXB2 119 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 ARMCX2Q7L311 632 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 OTOP2Q7RTS6 562 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 CCDC144CPQ8IYA2 1237 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 RPUSD2Q8IZ73 545 aaKnown RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 MKL1Q969V6 931 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 STRBPQ96SI9 672 aaKnown RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 UHRF1Q96T88 793 aaPredicted RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 SEZ6LQ9BYH1 1024 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 KATNBL1Q9H079 304 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 BCL11AQ9H165 835 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 NKX2-4Q9H2Z4 354 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 HIPK3Q9H422 1215 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 SLC38A10Q9HBR0 1119 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 RAVER2Q9HCJ3 691 aaKnown RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 ARPP21Q9UBL0 812 aaPredicted RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 CLIP2Q9UDT6 1046 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 FBXO40Q9UH90 709 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 RAPGEFL1Q9UHV5 662 aa6.37□□□□□ -1.39
VAPA-207ENST00000583879 GNEQ9Y223 722 aaKnown RBP6.37□□□□□ -1.39
VAPA-207ENST00000583879 FRMPD3Q5JV73 1810 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 GRIN2DO15399 1336 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 GSG1L2A8MUP6 293 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 MINDY4BA8MYZ0 360 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 TRIM66O15016 1216 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 DYNC1LI2O43237 492 aaPredicted RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 HMMRO75330 724 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 FDX1P10109 184 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 RASA1P20936 1047 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 PLA2G5P39877 138 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 CCL23P55773 120 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 SH3BP2P78314 561 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 BEX3Q00994 111 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 CNTN2Q02246 1040 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 IQSEC1Q6DN90 963 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 GIMAP6Q6P9H5 292 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 NOL8Q76FK4 1167 aaKnown RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 SIRT2Q8IXJ6 389 aa6.36□□□□□ -1.39
VAPA-207ENST00000583879 ZNF444Q8N0Y2 327 aaPredicted RBP6.36□□□□□ -1.39
VAPA-207ENST00000583879 STK11IPQ8N1F8 1099 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms