RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 DAGLBQ8NCG7 672 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 GPRC5AQ8NFJ5 357 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
GGA3-217ENST00000583667 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 GDPD2Q9HCC8 539 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 TXNRD2Q9NNW7 524 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 PHIPQ8WWQ0 1821 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 FAM196BA6NMK8 535 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 MSCO60682 206 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 GH2P01242 217 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 CNGA1P29973 690 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 CAP2P40123 477 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 HMGCS2P54868 508 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 JAG1P78504 1218 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 ICA1Q05084 483 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 TNFRSF25Q93038 417 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
GGA3-217ENST00000583667 RRP36Q96EU6 259 aaKnown RBP13.67□□□□□ -0.22
GGA3-217ENST00000583667 APBA2Q99767 749 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 FLRT1Q9NZU1 646 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
GGA3-217ENST00000583667 TCHHQ07283 1943 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 F5H6K3 240 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 PPP6R2O75170 966 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 ASNSP08243 561 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 MAPK4P31152 587 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 KRT2P35908 639 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 ZNF445P59923 1031 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 TLE2Q04725 743 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 KLRC3Q07444 240 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 AAK1Q2M2I8 961 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 Q3C1V9 767 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 LRRC47Q8N1G4 583 aaKnown RBP13.66□□□□□ -0.22
GGA3-217ENST00000583667 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 CCDC12Q8WUD4 166 aaPredicted RBP13.66□□□□□ -0.22
GGA3-217ENST00000583667 PGBD1Q96JS3 809 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 PBX4Q9BYU1 374 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 PORCNQ9H237 461 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 FRMPD3Q5JV73 1810 aa13.66□□□□□ -0.22
GGA3-217ENST00000583667 RLFQ13129 1914 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 A0A1W2PQ27 194 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 A0A1W2PQ64 194 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 A0A1W2PQD8 194 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 GRXCR1A8MXD5 290 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 M0R2N6 131 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 STXBP3O00186 592 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 PLA2G6O60733 806 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
GGA3-217ENST00000583667 FOSBP53539 338 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
GGA3-217ENST00000583667 PTPAQ15257 358 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 C1orf53Q5VUE5 145 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 MFSD14CQ5VZR4 134 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 SLFN13Q68D06 897 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 ADALQ6DHV7 355 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 ZMYND12Q9H0C1 365 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 PCDHA4Q9UN74 947 aa13.65□□□□□ -0.22
GGA3-217ENST00000583667 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 GDF11O95390 407 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 BMP15O95972 392 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 GOLGA8HP0CJ92 632 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
GGA3-217ENST00000583667 NLRP5P59047 1200 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 FPGSQ05932 587 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 PPP1R18Q6NYC8 613 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 TRPV1Q8NER1 839 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
GGA3-217ENST00000583667 MYH6P13533 1939 aa13.63□□□□□ -0.23
GGA3-217ENST00000583667 FAM237AA0A1B0GTK4 181 aa13.63□□□□□ -0.23
GGA3-217ENST00000583667 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
GGA3-217ENST00000583667 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms