RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SMARCA1P28370 1054 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 QRICH1Q2TAL8 776 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 GNASQ5JWF2 1037 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 APOA5Q6Q788 366 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 AGXT2Q9BYV1 514 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 ASB14A6NK59 587 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 CYTH3O43739 400 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 ANAPC15P60006 121 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 SMAD3P84022 425 aaKnown RBP28.83■■■□□ 2.21
TSEN54-209ENST00000583454 TNFAIP2Q03169 654 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 TAPT1Q6NXT6 567 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 Q6ZUG5 572 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 RUFY3Q7L099 469 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 FANCBQ8NB91 859 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 MORC4Q8TE76 937 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 CLEC4DQ8WXI8 215 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 LZTS2Q9BRK4 669 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 SPC25Q9HBM1 224 aa28.83■■■□□ 2.21
TSEN54-209ENST00000583454 GNAQP50148 359 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 BEX3Q00994 111 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 FPGSQ05932 587 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 TMEM63BQ5T3F8 832 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 ZNF697Q5TEC3 545 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 SYNE3Q6ZMZ3 975 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 IL17RAQ96F46 866 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 PDGFCQ9NRA1 345 aa28.82■■■□□ 2.2
TSEN54-209ENST00000583454 MROH7Q68CQ1 1323 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 ARVCFO00192 962 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 TIMP1P01033 207 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 SMPD1P17405 629 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 RXRAP19793 462 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 FAM126BQ8IXS8 530 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 SPZ1Q9BXG8 430 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 TTYH1Q9H313 450 aaPredicted RBP28.81■■■□□ 2.2
TSEN54-209ENST00000583454 CYP46A1Q9Y6A2 500 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 VCANP13611 3396 aa28.81■■■□□ 2.2
TSEN54-209ENST00000583454 A0A0U1RQG5 324 aaPredicted RBP28.8■■■□□ 2.2
TSEN54-209ENST00000583454 NFIBO00712 420 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 ZBTB5O15062 677 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 RCAN1P53805 252 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 FGD1P98174 961 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 NSMFQ6X4W1 530 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 TLK2Q86UE8 772 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 MICU3Q86XE3 530 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 FBXO11Q86XK2 927 aa28.8■■■□□ 2.2
TSEN54-209ENST00000583454 FBXO16Q8IX29 292 aaPredicted RBP28.8■■■□□ 2.2
TSEN54-209ENST00000583454 RNPC3Q96LT9 517 aaKnown RBP28.8■■■□□ 2.2
TSEN54-209ENST00000583454 KLF18A0A0U1RQI7 1052 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 ZBTB43O43298 467 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 RAB11FIP4Q86YS3 637 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 SLC43A3Q8NBI5 491 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 BRF1Q92994 677 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 PIGSQ96S52 555 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 MAF1Q9H063 256 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 SEMA6BQ9H3T3 888 aa28.79■■■□□ 2.2
TSEN54-209ENST00000583454 ABCB11O95342 1321 aa28.78■■■□□ 2.2
TSEN54-209ENST00000583454 PLEKHA8P1O95397 391 aa28.78■■■□□ 2.2
TSEN54-209ENST00000583454 BAATQ14032 418 aaPredicted RBP28.78■■■□□ 2.2
TSEN54-209ENST00000583454 USH1GQ495M9 461 aa28.78■■■□□ 2.2
TSEN54-209ENST00000583454 SRBD1Q8N5C6 995 aaKnown RBP28.78■■■□□ 2.2
TSEN54-209ENST00000583454 RGS22Q8NE09 1264 aa28.78■■■□□ 2.2
TSEN54-209ENST00000583454 AMNQ9BXJ7 453 aa28.78■■■□□ 2.2
TSEN54-209ENST00000583454 GRIN2DO15399 1336 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 PNMA6FA0A0J9YX94 578 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 DLL1O00548 723 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 PPP1R11O60927 126 aaPredicted RBP28.77■■■□□ 2.2
TSEN54-209ENST00000583454 CD4P01730 458 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 EVCP57679 992 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 APOBRQ0VD83 1088 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 MFSD5Q6N075 450 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 CXCL17Q6UXB2 119 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 TMTC3Q6ZXV5 915 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 C16orf59Q7L2K0 433 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 EEPD1Q7L9B9 569 aa28.77■■■□□ 2.2
TSEN54-209ENST00000583454 CDX2Q99626 313 aaPredicted RBP28.77■■■□□ 2.2
TSEN54-209ENST00000583454 UPF3BQ9BZI7 483 aaKnown RBP28.77■■■□□ 2.2
TSEN54-209ENST00000583454 FSCN1Q16658 493 aaKnown RBP28.76■■■□□ 2.19
TSEN54-209ENST00000583454 IQSEC1Q6DN90 963 aa28.76■■■□□ 2.19
TSEN54-209ENST00000583454 HOMER1Q86YM7 354 aa28.76■■■□□ 2.19
TSEN54-209ENST00000583454 VTI1AQ96AJ9 217 aa28.76■■■□□ 2.19
TSEN54-209ENST00000583454 VTA1Q9NP79 307 aa28.76■■■□□ 2.19
TSEN54-209ENST00000583454 RBM28Q9NW13 759 aaKnown RBP28.76■■■□□ 2.19
TSEN54-209ENST00000583454 MRPL11Q9Y3B7 192 aaKnown RBP28.76■■■□□ 2.19
TSEN54-209ENST00000583454 CHD7Q9P2D1 2997 aa28.75■■■□□ 2.19
TSEN54-209ENST00000583454 SPTBN5Q9NRC6 3674 aaKnown RBP28.75■■■□□ 2.19
TSEN54-209ENST00000583454 ALDH5A1P51649 535 aaPredicted RBP28.75■■■□□ 2.19
TSEN54-209ENST00000583454 SLC30A10Q6XR72 485 aa28.75■■■□□ 2.19
TSEN54-209ENST00000583454 NOL8Q76FK4 1167 aaKnown RBP28.75■■■□□ 2.19
TSEN54-209ENST00000583454 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.75■■■□□ 2.192e-6■■■■□ 23.8
TSEN54-209ENST00000583454 FAM217BQ9NTX9 383 aaPredicted RBP28.75■■■□□ 2.19
TSEN54-209ENST00000583454 Q9Y3F1 56 aa28.75■■■□□ 2.19
TSEN54-209ENST00000583454 DYNC1LI2O43237 492 aaPredicted RBP28.74■■■□□ 2.19
TSEN54-209ENST00000583454 TRAF1Q13077 416 aa28.74■■■□□ 2.19
TSEN54-209ENST00000583454 TOB2Q14106 344 aaPredicted RBP28.74■■■□□ 2.19
TSEN54-209ENST00000583454 PPP2R5BQ15173 497 aa28.74■■■□□ 2.19
TSEN54-209ENST00000583454 RTN1Q16799 776 aa28.74■■■□□ 2.19
TSEN54-209ENST00000583454 RNF207Q6ZRF8 634 aa28.74■■■□□ 2.19
TSEN54-209ENST00000583454 CMTR1Q8N1G2 835 aaKnown RBP28.74■■■□□ 2.19
TSEN54-209ENST00000583454 PCDHA1Q9Y5I3 950 aa28.74■■■□□ 2.19
TSEN54-209ENST00000583454 RRP36Q96EU6 259 aaKnown RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms