RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
TNFAIP1-206ENST00000583213 TRMT13Q9NUP7 481 aaKnown RBP18.84■□□□□ 0.61
TNFAIP1-206ENST00000583213 KIAA1217Q5T5P2 1943 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 B4DLN1 442 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 MRPL12P52815 198 aaKnown RBP18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 CCL23P55773 120 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 GHRHRQ02643 423 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 PTPN11Q06124 597 aaPredicted RBP18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 RPUSD2Q8IZ73 545 aaKnown RBP18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 USP38Q8NB14 1042 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 CPVLQ9H3G5 476 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 ZSWIM5Q9P217 1185 aa18.83■□□□□ 0.6
TNFAIP1-206ENST00000583213 MYH6P13533 1939 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 B4E1Z4 1266 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 ARIH2O95376 493 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 USH1GQ495M9 461 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 BRDTQ58F21 947 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 SYTL5Q8TDW5 730 aaPredicted RBP18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 KAT14Q9H8E8 782 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 COL20A1Q9P218 1284 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 CTNNA3Q9UI47 895 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 MSRAQ9UJ68 235 aa18.82■□□□□ 0.6
TNFAIP1-206ENST00000583213 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 MYL3P08590 195 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 TXNP10599 105 aaKnown RBP18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 IMMTQ16891 758 aaKnown RBP18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 NBPF20Q3BBV1 942 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 COPS5Q92905 334 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 IL25Q9H293 177 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 CNNM2Q9H8M5 875 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 YBX2Q9Y2T7 364 aaKnown RBP18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 SCN5AQ14524 2016 aa18.81■□□□□ 0.6
TNFAIP1-206ENST00000583213 NCOR1O75376 2440 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 CYP2C9P11712 490 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 RFC2P35250 354 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 ADGRE1Q14246 886 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 QRICH1Q2TAL8 776 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 SESTD1Q86VW0 696 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 MCF2L2Q86YR7 1114 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 NSUN6Q8TEA1 469 aaKnown RBP18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 TBC1D5Q92609 795 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 MTMR8Q96EF0 704 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 SCLYQ96I15 445 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 KRT23Q9C075 422 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 GPHNQ9NQX3 736 aaPredicted RBP18.8■□□□□ 0.6
TNFAIP1-206ENST00000583213 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 ARHGAP1Q07960 439 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 SEC23AQ15436 765 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 EMID1Q96A84 441 aaPredicted RBP18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 TAAR1Q96RJ0 339 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 GAS2L1Q99501 681 aaPredicted RBP18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 PRDM12Q9H4Q4 367 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 SLC4A7Q9Y6M7 1214 aa18.79■□□□□ 0.6
TNFAIP1-206ENST00000583213 OPLAHO14841 1288 aa18.78■□□□□ 0.6
TNFAIP1-206ENST00000583213 FBXO11Q86XK2 927 aa18.78■□□□□ 0.6
TNFAIP1-206ENST00000583213 NKX2-4Q9H2Z4 354 aa18.78■□□□□ 0.6
TNFAIP1-206ENST00000583213 MRPL11Q9Y3B7 192 aaKnown RBP18.78■□□□□ 0.6
TNFAIP1-206ENST00000583213 MMP3P08254 477 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 HSD17B4P51659 736 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 RBL2Q08999 1139 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 KAT2BQ92831 832 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 RMDN3Q96TC7 470 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 UBAC1Q9BSL1 405 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 SLC28A3Q9HAS3 691 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 REV3LO60673 3130 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 TET1Q8NFU7 2136 aa18.77■□□□□ 0.6
TNFAIP1-206ENST00000583213 GH1P01241 217 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 IQCF3P0C7M6 154 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 GSPT1P15170 499 aaKnown RBP18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 ATP2A2P16615 1042 aaKnown RBP18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 STXBP2Q15833 593 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 STAG2Q8N3U4 1231 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 AFG1LQ8WV93 481 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 MAP3K20Q9NYL2 800 aaKnown RBP18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 BDP1A6H8Y1 2624 aa18.76■□□□□ 0.59
TNFAIP1-206ENST00000583213 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 EIF3JO75822 258 aaKnown RBP18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 PDE4AP27815 886 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 RABGGTBP53611 331 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 LY6KQ17RY6 165 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 FAM47CQ5HY64 1035 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 PHOSPHO2Q8TCD6 241 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 AMNQ9BXJ7 453 aa18.75■□□□□ 0.59
TNFAIP1-206ENST00000583213 PXMP2Q9NR77 195 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms