RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMCHD1-204ENST00000581226 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
SMCHD1-204ENST00000581226 PTCH2Q9Y6C5 1203 aa6.82□□□□□ -1.32
SMCHD1-204ENST00000581226 OR14I1A6ND48 311 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 MPOP05164 745 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 BCL6P41182 706 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 RBM10P98175 930 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 KCNT2Q6UVM3 1135 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 NOP9Q86U38 636 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 FMNL2Q96PY5 1086 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 MTA3Q9BTC8 594 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 NSUN3Q9H649 340 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 KANSL2Q9H9L4 492 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 GPR27Q9NS67 375 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 MARCH2Q9P0N8 246 aa6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 MRPS23Q9Y3D9 190 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-204ENST00000581226 GTF2A2P52657 109 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 STYK1Q6J9G0 422 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 RSPO2Q6UXX9 243 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 CEP68Q76N32 757 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 CABP7Q86V35 215 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 TEX2Q8IWB9 1127 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 KISS1RQ969F8 398 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 TNFRSF12AQ9NP84 129 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 ARID1BQ8NFD5 2236 aaPredicted RBP6.8□□□□□ -1.32
SMCHD1-204ENST00000581226 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 NUDT19A8MXV4 375 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 C22orf46C9J442 243 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 MSCO60682 206 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 LSAMPQ13449 338 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 RAB3GAP1Q15042 981 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 ZNF605Q86T29 641 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 PLEKHO2Q8TD55 490 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 TRMT2BQ96GJ1 504 aaKnown RBP6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 TMEM169Q96HH4 297 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 DCP1AQ9NPI6 582 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 FBLN5Q9UBX5 448 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 TRAF6Q9Y4K3 522 aa6.79□□□□□ -1.32
SMCHD1-204ENST00000581226 CYBBP04839 570 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 C6orf222P0C671 652 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 GLI4P10075 376 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 SQSTM1Q13501 440 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 PAQR3Q6TCH7 311 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 IFNL3Q8IZI9 196 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 ZFYVE21Q9BQ24 234 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 EPB41L4BQ9H329 900 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 ZNF552Q9H707 407 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 KCNK12Q9HB15 430 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 MRPL42Q9Y6G3 142 aaKnown RBP6.78□□□□□ -1.32
SMCHD1-204ENST00000581226 ASXL2Q76L83 1435 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 SRGAP3O43295 1099 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 NTRK1P04629 796 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 DBHP09172 617 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 FPR2P25090 351 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 GPR85P60893 370 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 GABREP78334 506 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 NR1I3Q14994 352 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 RPTNQ6XPR3 784 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 LBX2Q6XYB7 198 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 MAMDC2Q7Z304 686 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 RXFP1Q9HBX9 757 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 CLDND1Q9NY35 253 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 KLHL14Q9P2G3 628 aa6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 DBR1Q9UK59 544 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-204ENST00000581226 ZC3H12DA2A288 527 aaKnown RBP6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 F8W031 263 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 H7BY64 318 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 AQP7O14520 342 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 ABLIM1O14639 778 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 TMEM62Q0P6H9 643 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 CBX2Q14781 532 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 WWC2Q6AWC2 1192 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 NLRP10Q86W26 655 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 TMEM260Q9NX78 707 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 NDOR1Q9UHB4 597 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 COA3Q9Y2R0 106 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 X6R8D5 127 aa6.76□□□□□ -1.33
SMCHD1-204ENST00000581226 HRKO00198 91 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 YBX1P67809 324 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 KIZQ2M2Z5 673 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 MROH9Q5TGP6 573 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 OLFML2BQ68BL8 750 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 TMEM132EQ6IEE7 984 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 NETO2Q8NC67 525 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 FBXO15Q8NCQ5 510 aaPredicted RBP6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
SMCHD1-204ENST00000581226 PEX10O60683 326 aa6.74□□□□□ -1.33
SMCHD1-204ENST00000581226 FARP2O94887 1054 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-204ENST00000581226 ASMTLO95671 621 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms