RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
SUPT4H1-205ENST00000581166 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
SUPT4H1-205ENST00000581166 NKRFO15226 690 aaKnown RBP eCLIP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 CABYRO75952 493 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PTGS1P23219 599 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 ANKRD33Q7Z3H0 272 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 SCFD2Q8WU76 684 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 VTI1AQ96AJ9 217 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 TOX2Q96NM4 488 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PRDM5Q9NQX1 630 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 A0A0U1RQG5 324 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PQBP1O60828 265 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 CLTBP09497 229 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 CDK7P50613 346 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 EXOSC10Q01780 885 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PPP2R5BQ15173 497 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 RRP36Q96EU6 259 aaKnown RBP16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
SUPT4H1-205ENST00000581166 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
SUPT4H1-205ENST00000581166 LTBP2Q14767 1821 aa16.27■□□□□ 0.2
SUPT4H1-205ENST00000581166 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 ARVCFO00192 962 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 HMGB1P09429 215 aaKnown RBP16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 STXBP2Q15833 593 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 TDHQ8IZJ6 230 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 KCNB2Q92953 911 aa16.27■□□□□ 0.19
SUPT4H1-205ENST00000581166 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 GCOM1H8Y6P7 765 aaPredicted RBP16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 REC8O95072 547 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 NR3C2P08235 984 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 POLR2MP0CAP2 368 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 TXNP10599 105 aaKnown RBP16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 RXRAP19793 462 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 HSPA4P34932 840 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 CPT1AP50416 773 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 FAAP100Q0VG06 881 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 TTLL4Q14679 1199 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 CXCL17Q6UXB2 119 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 SRBD1Q8N5C6 995 aaKnown RBP16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
SUPT4H1-205ENST00000581166 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 EIF3JO75822 258 aaKnown RBP16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 CCDC62Q6P9F0 684 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 SEZ6LQ9BYH1 1024 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 TMEM39AQ9NV64 488 aa16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
SUPT4H1-205ENST00000581166 KIAA1217Q5T5P2 1943 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 ARIH2O95376 493 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 SEPT14Q6ZU15 432 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 RAB11FIP4Q86YS3 637 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 SLC43A3Q8NBI5 491 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 COPS5Q92905 334 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 BADQ92934 168 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
SUPT4H1-205ENST00000581166 A6NJR5 290 aa16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 ITGA7Q13683 1181 aa16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 PGM5Q15124 567 aa16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 FAM126BQ8IXS8 530 aa16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
SUPT4H1-205ENST00000581166 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 TLR3O15455 904 aaKnown RBP16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 KPNA6O60684 536 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 RAG1P15918 1043 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 ITGB8P26012 769 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 PURAQ00577 322 aaKnown RBP16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 LRIT3Q3SXY7 679 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 VSIG10LQ86VR7 867 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 TBX21Q9UL17 535 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 GRIN2DO15399 1336 aa16.22■□□□□ 0.19
SUPT4H1-205ENST00000581166 ZBTB43O43298 467 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 GH1P01241 217 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 CD4P01730 458 aa16.21■□□□□ 0.19
SUPT4H1-205ENST00000581166 MYL3P08590 195 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms