RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 NMRK2Q9NPI5 230 aa9.08□□□□□ -0.96
KPNB1-210ENST00000580573 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
KPNB1-210ENST00000580573 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
KPNB1-210ENST00000580573 TMEM260Q9NX78 707 aa9.08□□□□□ -0.96
KPNB1-210ENST00000580573 MAP3K20Q9NYL2 800 aaKnown RBP9.08□□□□□ -0.96
KPNB1-210ENST00000580573 ZNF214Q9UL59 606 aaPredicted RBP9.08□□□□□ -0.96
KPNB1-210ENST00000580573 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 TRAF5O00463 557 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 GPR37O15354 613 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 NR1I2O75469 434 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 FLOT1O75955 427 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 CYP3A4P08684 503 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 GCFC2P16383 781 aaKnown RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 CIITAP33076 1130 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 GJA5P36382 358 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 SREBF1P36956 1147 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP11P51784 963 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 SNAP25P60880 206 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 IKQ13123 557 aaPredicted RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 PTGDRQ13258 359 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 PRKG1Q13976 671 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 COG2Q14746 738 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 UBE2SQ16763 222 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ZSCAN23Q3MJ62 389 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 CCDC183Q5T5S1 534 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 CAVIN1Q6NZI2 390 aaKnown RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 MOB2Q70IA6 237 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 CCAR1Q8IX12 1150 aaKnown RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ELOA2Q8IYF1 753 aaPredicted RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 TBCKQ8TEA7 893 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 WNK4Q96J92 1243 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 TIGD1Q96MW7 591 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ANO3Q9BYT9 981 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 TANGO6Q9C0B7 1094 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ELP3Q9H9T3 547 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 TMOD4Q9NZQ9 345 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ISY1Q9ULR0 285 aaKnown RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 MRPL11Q9Y3B7 192 aaKnown RBP9.07□□□□□ -0.96
KPNB1-210ENST00000580573 ZNF236Q9UL36 1845 aa9.07□□□□□ -0.96
KPNB1-210ENST00000580573 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 PASKQ96RG2 1323 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 FSD2A1L4K1 749 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 GOLGA6L4A6NEF3 574 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 PFKFB1P16118 471 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 MARCKSP29966 332 aaPredicted RBP9.06□□□□□ -0.96
KPNB1-210ENST00000580573 GRIN1Q05586 938 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 ZNF174Q15697 407 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 IL17AQ16552 155 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 USH1GQ495M9 461 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 TREML2Q5T2D2 321 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 JAKMIP3Q5VZ66 844 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 USP17L6PQ6QN14 398 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 FSIP1Q8NA03 581 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 ATG4CQ96DT6 458 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 NAP1L4Q99733 375 aaKnown RBP9.06□□□□□ -0.96
KPNB1-210ENST00000580573 FUCA2Q9BTY2 467 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 TMEM60Q9H2L4 133 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 CLSTN2Q9H4D0 955 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 GBA2Q9HCG7 927 aaPredicted RBP9.06□□□□□ -0.96
KPNB1-210ENST00000580573 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 DACT1Q9NYF0 836 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 AGTPBP1Q9UPW5 1226 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 PLXNA1Q9UIW2 1896 aa9.06□□□□□ -0.96
KPNB1-210ENST00000580573 PLXNB2O15031 1838 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 ZBED4O75132 1171 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 LETM1O95202 739 aaPredicted RBP9.05□□□□□ -0.96
KPNB1-210ENST00000580573 TAL1P17542 331 aaPredicted RBP9.05□□□□□ -0.96
KPNB1-210ENST00000580573 MCM7P33993 719 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
KPNB1-210ENST00000580573 NDUFA8P51970 172 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.961e-10■■□□□ 13.2
KPNB1-210ENST00000580573 TMEM132BQ14DG7 1078 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 TKFCQ3LXA3 575 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 CCDC174Q6PII3 467 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 CCDC73Q6ZRK6 1079 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 LENG9Q96B70 501 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 OTUD5Q96G74 571 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 CLIC6Q96NY7 704 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 EPAS1Q99814 870 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 CSRNP2Q9H175 543 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 KCNMB3Q9NPA1 279 aa9.05□□□□□ -0.96
KPNB1-210ENST00000580573 CCPG1Q9ULG6 757 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms