RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CALM3P0DP25 149 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 DNAJB2P25686 324 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 RASEFQ8IZ41 740 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 MTMR8Q96EF0 704 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 RIOX1Q9H6W3 641 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 SLC12A7Q9Y666 1083 aa28.83■■■□□ 2.21
CDC42EP4-205ENST00000580315 SPTBN5Q9NRC6 3674 aaKnown RBP28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 A0A0U1RQG5 324 aaPredicted RBP28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 ARVCFO00192 962 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 CTAGE5O15320 804 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 HMGB1P09429 215 aaKnown RBP28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 ALDH5A1P51649 535 aaPredicted RBP28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 GRIN2CQ14957 1233 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 HOMER1Q86YM7 354 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 PURBQ96QR8 312 aaKnown RBP28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 MYL10Q9BUA6 226 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 ASTN1O14525 1302 aa28.82■■■□□ 2.2
CDC42EP4-205ENST00000580315 B4DLN1 442 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 GNAQP50148 359 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 MRPL12P52815 198 aaKnown RBP28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 NKX3-2P78367 333 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 SYNE3Q6ZMZ3 975 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 C16orf59Q7L2K0 433 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 DHX32Q7L7V1 743 aaKnown RBP28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 DNERQ8NFT8 737 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 MORC4Q8TE76 937 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 PIGSQ96S52 555 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 LZTS2Q9BRK4 669 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 LRRC2Q9BYS8 371 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 MCM3APO60318 1980 aa28.81■■■□□ 2.2
CDC42EP4-205ENST00000580315 HSPA4P34932 840 aa28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 PPIGQ13427 754 aaKnown RBP eCLIP28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 COL9A3Q14050 684 aaPredicted RBP28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 FAM126BQ8IXS8 530 aa28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 VTA1Q9NP79 307 aa28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 PCDHA1Q9Y5I3 950 aa28.8■■■□□ 2.2
CDC42EP4-205ENST00000580315 CSF2RAP15509 400 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 TNFAIP2Q03169 654 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 ADCK5Q3MIX3 580 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 TMEM240Q5SV17 173 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 SGMS1Q86VZ5 419 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 KCNB2Q92953 911 aa28.79■■■□□ 2.2
CDC42EP4-205ENST00000580315 PNMA6FA0A0J9YX94 578 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 EPB41L2O43491 1005 aaKnown RBP28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 SMARCA1P28370 1054 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 BEX3Q00994 111 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 EXOSC10Q01780 885 aaKnown RBP28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 PDE4DQ08499 809 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 SLC35G1Q2M3R5 365 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 NOL8Q76FK4 1167 aaKnown RBP28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 ZNF576Q9H609 170 aa28.78■■■□□ 2.2
CDC42EP4-205ENST00000580315 CYTH3O43739 400 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 RASIP1Q5U651 963 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 EEPD1Q7L9B9 569 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 FBXO16Q8IX29 292 aaPredicted RBP28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 TMEM199Q8N511 208 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 TIFAQ96CG3 184 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 SPZ1Q9BXG8 430 aa28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 DDX49Q9Y6V7 483 aaKnown RBP28.77■■■□□ 2.2
CDC42EP4-205ENST00000580315 TLR3O15455 904 aaKnown RBP28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 PPP1R11O60927 126 aaPredicted RBP28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 IQSEC1Q6DN90 963 aa28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 SYTL5Q8TDW5 730 aaPredicted RBP28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 RRP36Q96EU6 259 aaKnown RBP28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 PPP1R12CQ9BZL4 782 aa28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 GNEQ9Y223 722 aaKnown RBP28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 SNX14Q9Y5W7 946 aa28.76■■■□□ 2.19
CDC42EP4-205ENST00000580315 TTC28Q96AY4 2481 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 CFBP00751 764 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 CD4P01730 458 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 FGD1P98174 961 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 CXCL17Q6UXB2 119 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 SAMD3Q8N6K7 520 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 TBC1D5Q92609 795 aa28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 JAKMIP1Q96N16 626 aaKnown RBP28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 MAP3K20Q9NYL2 800 aaKnown RBP28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 SEC63Q9UGP8 760 aaKnown RBP28.75■■■□□ 2.19
CDC42EP4-205ENST00000580315 ACRP10323 421 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 RXRAP19793 462 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 TAPT1Q6NXT6 567 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 ZNF365Q70YC5 407 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 TLK2Q86UE8 772 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 MICU3Q86XE3 530 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 FANCBQ8NB91 859 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 SLC43A3Q8NBI5 491 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 NSUN6Q8TEA1 469 aaKnown RBP28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 PIBF1Q8WXW3 757 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 TCEANC2Q96MN5 208 aa28.74■■■□□ 2.19
CDC42EP4-205ENST00000580315 GRXCR1A8MXD5 290 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 EDNRBP24530 442 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 PSMA5P28066 241 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 CYP2C18P33260 490 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 PBX2P40425 430 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 BLOC1S2Q6QNY1 142 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 RAB11FIP4Q86YS3 637 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 TAAR1Q96RJ0 339 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 RMDN3Q96TC7 470 aa28.73■■■□□ 2.19
CDC42EP4-205ENST00000580315 PBX4Q9BYU1 374 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms