RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CDK5RAP3Q96JB5 506 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 THAP9Q9H5L6 903 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 DLEC1Q9Y238 1755 aa11.71□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 N4BP1O75113 896 aaKnown RBP11.7□□□□□ -0.54
TOP3A-209ENST00000580095 FECHP22830 423 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CCNE1P24864 410 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 PRPHP41219 470 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 MIIPQ5JXC2 388 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 NEK11Q8NG66 645 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CALML4Q96GE6 196 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 PSMB7Q99436 277 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 POLD4Q9HCU8 107 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CAPN11Q9UMQ6 739 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 LAMB1P07942 1786 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 BTAF1O14981 1849 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 H3BQF6 201 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 SRGNP10124 158 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 ADCY7P51828 1080 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 APBA1Q02410 837 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 ADGRF4Q8IZF3 695 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 DNAJC7Q99615 494 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 NHEJ1Q9H9Q4 299 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CTAGE15A4D2H0 777 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 MARCH6O60337 910 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 PHACTR2O75167 634 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 TRIM37O94972 964 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CTAGE8P0CG41 777 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 DNM2P50570 870 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 USP17L6PQ6QN14 398 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CTAGE6Q86UF2 777 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 CTAGE4Q8IX94 777 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 JMJD4Q9H9V9 463 aa11.7□□□□□ -0.54
TOP3A-209ENST00000580095 NPHP3-ACAD11A0A0J9YXS1 232 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 LAD1O00515 517 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 TRIM14Q14142 442 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 DHTKD1Q96HY7 919 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-209ENST00000580095 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-209ENST00000580095 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 C7orf25Q9BPX7 421 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 PDE11AQ9HCR9 933 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 ZNF263O14978 683 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 PLCG2P16885 1265 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 ENOX2Q16206 610 aaKnown RBP11.69□□□□□ -0.54
TOP3A-209ENST00000580095 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 DDX12PQ92771 950 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 AK8Q96MA6 479 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
TOP3A-209ENST00000580095 AMPD2Q01433 879 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 NELFCDQ8IXH7 590 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 LARP4BQ92615 738 aaKnown RBP11.68□□□□□ -0.54
TOP3A-209ENST00000580095 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
TOP3A-209ENST00000580095 JAKMIP2Q96AA8 810 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 TRIM34Q9BYJ4 488 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 TTYH3Q9C0H2 523 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 RGL2O15211 777 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 STAT3P40763 770 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 GSPT2Q8IYD1 628 aaKnown RBP11.68□□□□□ -0.54
TOP3A-209ENST00000580095 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 CRACR2AQ9BSW2 395 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 ZHX3Q9H4I2 956 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 SMARCAL1Q9NZC9 954 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 SERPINB13Q9UIV8 391 aa11.68□□□□□ -0.54
TOP3A-209ENST00000580095 FAM170AA1A519 330 aa11.67□□□□□ -0.54
TOP3A-209ENST00000580095 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-209ENST00000580095 BBOX1O75936 387 aa11.67□□□□□ -0.54
TOP3A-209ENST00000580095 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-209ENST00000580095 KIAA0825Q8IV33 1275 aa11.67□□□□□ -0.54
TOP3A-209ENST00000580095 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
TOP3A-209ENST00000580095 YY1AP1Q9H869 796 aa11.67□□□□□ -0.54
TOP3A-209ENST00000580095 MLXIPQ9HAP2 919 aa11.67□□□□□ -0.54
TOP3A-209ENST00000580095 ZNHIT6Q9NWK9 470 aaKnown RBP11.67□□□□□ -0.54
TOP3A-209ENST00000580095 GAKO14976 1311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms