RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 MUM1Q2TAK8 710 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 FILIP1LQ4L180 1135 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 SWSAP1Q6NVH7 229 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 RSRC2Q7L4I2 434 aaKnown RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 MCM10Q7L590 875 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 ATG4DQ86TL0 474 aaPredicted RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 MORC1Q86VD1 984 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 DGKHQ86XP1 1220 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 WDR66Q8TBY9 1149 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 C17orf50Q8WW18 174 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 MRPL9Q9BYD2 267 aaKnown RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 KRTAP4-11Q9BYQ6 195 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 RWDD1Q9H446 243 aaPredicted RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 CCDC86Q9H6F5 360 aaKnown RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 DISC1Q9NRI5 854 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 GINM1Q9NU53 330 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 ZIM2Q9NZV7 527 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 C6orf203Q9P0P8 240 aaPredicted RBP7.53□□□□□ -1.2
COPS3-216ENST00000579716 KNSTRNQ9Y448 316 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 IPPQ9Y573 584 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 PCDHGB7Q9Y5F8 929 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 PIK3R4Q99570 1358 aa7.53□□□□□ -1.2
COPS3-216ENST00000579716 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.2
COPS3-216ENST00000579716 DBX1A6NMT0 343 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 E2F6O75461 281 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 LEFTY1O75610 366 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 BAG2O95816 211 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 FAM87AP0C7U9 286 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 SKILP12757 684 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 XBP1P17861 261 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 PLIN5Q00G26 463 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 MESP2Q0VG99 397 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 FXNQ16595 210 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 AGAP9Q5VTM2 703 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 TMC7Q7Z402 723 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
COPS3-216ENST00000579716 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 PI4K2BQ8TCG2 481 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 ATXN2LQ8WWM7 1075 aaKnown RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 JPH3Q8WXH2 748 aaPredicted RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 SH3KBP1Q96B97 665 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 TBATAQ96M53 351 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 GSDMAQ96QA5 445 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 UIMC1Q96RL1 719 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 CORO1BQ9BR76 489 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 RBCK1Q9BYM8 510 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 RPAP3Q9H6T3 665 aaPredicted RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 DBNDD1Q9H9R9 158 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 MCM8Q9UJA3 840 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 GTF3C4Q9UKN8 822 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.21
COPS3-216ENST00000579716 PAXBP1Q9Y5B6 917 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 KIF16BQ96L93 1317 aa7.52□□□□□ -1.21
COPS3-216ENST00000579716 KCNQ2O43526 872 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PIP5K1CO60331 668 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 BBOX1O75936 387 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 IGHA2P01877 340 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 GRK2P25098 689 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 HOXD10P28358 340 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PRPHP41219 470 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 MAGEA8P43361 318 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 UBASH3AP57075 661 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 BPIFB3P59826 476 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 MLC1Q15049 377 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PPP2R5BQ15173 497 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 RILPL1Q5EBL4 403 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 IL31Q6EBC2 164 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 HIBCHQ6NVY1 386 aaPredicted RBP7.51□□□□□ -1.21
COPS3-216ENST00000579716 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 LRRN4CLQ8ND94 238 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 NETO1Q8TDF5 533 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.51□□□□□ -1.21
COPS3-216ENST00000579716 MAML1Q92585 1016 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 FANCD2OSQ96PS1 177 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
COPS3-216ENST00000579716 TMEM260Q9NX78 707 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 FBXO10Q9UK96 956 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 AFG3L2Q9Y4W6 797 aa7.51□□□□□ -1.21
COPS3-216ENST00000579716 KLRG2A4D1S0 409 aaPredicted RBP7.5□□□□□ -1.21
COPS3-216ENST00000579716 FAM221BA6H8Z2 402 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 TREHO43280 583 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
COPS3-216ENST00000579716 TRIM27P14373 513 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 TYRP1P17643 537 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 IL4RP24394 825 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 NEK3P51956 506 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 OXCT1P55809 520 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 KRT83P78385 493 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 TKFCQ3LXA3 575 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 SLC10A5Q5PT55 438 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 LVRNQ6Q4G3 990 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 CCDC129Q6ZRS4 1044 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 FAM214BQ7L5A3 538 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 TCEAL8Q8IYN2 117 aa7.5□□□□□ -1.21
COPS3-216ENST00000579716 CCAR2Q8N163 923 aaKnown RBP7.5□□□□□ -1.21
COPS3-216ENST00000579716 GIMAP8Q8ND71 665 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms