RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 RFXAPO00287 272 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 FGAP02671 866 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 MRPL12P52815 198 aaKnown RBP10.06□□□□□ -0.8
CASC3-206ENST00000579238 TFF2Q03403 129 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 TTC14Q96N46 770 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 NECAB3Q96P71 396 aaPredicted RBP10.06□□□□□ -0.8
CASC3-206ENST00000579238 FTOQ9C0B1 505 aaKnown RBP eCLIP10.06□□□□□ -0.8
CASC3-206ENST00000579238 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
CASC3-206ENST00000579238 EPOPA6NHQ4 379 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 TXNP10599 105 aaKnown RBP10.05□□□□□ -0.8
CASC3-206ENST00000579238 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
CASC3-206ENST00000579238 KCNQ1P51787 676 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 TAP1Q03518 808 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 COPS5Q92905 334 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 C1QTNF1Q9BXJ1 281 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 MAF1Q9H063 256 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 CERS4Q9HA82 394 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 ZBTB47Q9UFB7 747 aaPredicted RBP10.05□□□□□ -0.8
CASC3-206ENST00000579238 RAPGEFL1Q9UHV5 662 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 COG5Q9UP83 839 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 NOD1Q9Y239 953 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 XIRP2A4UGR9 3374 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 SCN5AQ14524 2016 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
CASC3-206ENST00000579238 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 ARIH2O95376 493 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 HSPD1P10809 573 aaKnown RBP10.04□□□□□ -0.8
CASC3-206ENST00000579238 PTGISQ16647 500 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 GPATCH4Q5T3I0 446 aaKnown RBP10.04□□□□□ -0.8
CASC3-206ENST00000579238 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 SESTD1Q86VW0 696 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 CAGE1Q8TC20 777 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 ARNTL2Q8WYA1 636 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
CASC3-206ENST00000579238 TCF20Q9UGU0 1960 aaKnown RBP10.04□□□□□ -0.8
CASC3-206ENST00000579238 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 TLL1O43897 1013 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 PARNO95453 639 aaKnown RBP10.03□□□□□ -0.8
CASC3-206ENST00000579238 GH1P01241 217 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 PLA2G5P39877 138 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 KCNJ6P48051 423 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 PDE1AP54750 535 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 HAND2P61296 217 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 USH1GQ495M9 461 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 KRT40Q6A162 431 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 MFSD6Q6ZSS7 791 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
CASC3-206ENST00000579238 TET1Q8NFU7 2136 aa10.03□□□□□ -0.8
CASC3-206ENST00000579238 REV3LO60673 3130 aa10.02□□□□□ -0.8
CASC3-206ENST00000579238 MMP3P08254 477 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 SELPP16109 830 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 CASTP20810 708 aaKnown RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 NT5C2P49902 561 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 ARHGAP1Q07960 439 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 RBL2Q08999 1139 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 GRB10Q13322 594 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 GPNMBQ14956 572 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 LY6KQ17RY6 165 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 GDF6Q6KF10 455 aaPredicted RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 CNKSR3Q6P9H4 555 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 SEPT14Q6ZU15 432 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 ZNF589Q86UQ0 364 aaPredicted RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 DGKHQ86XP1 1220 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 TBC1D10CQ8IV04 446 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 SYTL5Q8TDW5 730 aaPredicted RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 NSUN6Q8TEA1 469 aaKnown RBP10.02□□□□□ -0.81
CASC3-206ENST00000579238 ESR2Q92731 530 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 KAT2BQ92831 832 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 HLA-CQ95604 372 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 FAM122AQ96E09 287 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 CTAGE1Q96RT6 745 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 LMCD1Q9NZU5 365 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 ABCB11O95342 1321 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
CASC3-206ENST00000579238 LPXNO60711 386 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 CXCL10P02778 98 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
CASC3-206ENST00000579238 NMIQ13287 307 aaPredicted RBP10.01□□□□□ -0.81
CASC3-206ENST00000579238 STXBP2Q15833 593 aa10.01□□□□□ -0.81
CASC3-206ENST00000579238 CDC37Q16543 378 aaPredicted RBP10.01□□□□□ -0.81
CASC3-206ENST00000579238 DGKDQ16760 1214 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms