RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
SSH2-208ENST00000579040 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
SSH2-208ENST00000579040 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 A6NJR5 290 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 B4GALT4O60513 344 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 TXNP10599 105 aaKnown RBP13.42□□□□□ -0.26
SSH2-208ENST00000579040 HSD17B4P51659 736 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 PSMC6P62333 389 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 WTAPQ15007 396 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 STXBP2Q15833 593 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 PSRC1Q6PGN9 363 aaPredicted RBP13.42□□□□□ -0.26
SSH2-208ENST00000579040 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 TAAR1Q96RJ0 339 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.26
SSH2-208ENST00000579040 MTA3Q9BTC8 594 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
SSH2-208ENST00000579040 HIPK3Q9H422 1215 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
SSH2-208ENST00000579040 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
SSH2-208ENST00000579040 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
SSH2-208ENST00000579040 MYL3P08590 195 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 SUPT20HL2P0C7V6 817 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 CSF2RAP15509 400 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 CYP2C18P33260 490 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 TMEM240Q5SV17 173 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 ARHGEF16Q5VV41 709 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 CCDC62Q6P9F0 684 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 STOX1Q6ZVD7 989 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 SLC17A8Q8NDX2 589 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 NOC4LQ9BVI4 516 aaKnown RBP13.41□□□□□ -0.26
SSH2-208ENST00000579040 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 IL23AQ9NPF7 189 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 RBM8AQ9Y5S9 174 aaKnown RBP13.41□□□□□ -0.26
SSH2-208ENST00000579040 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
SSH2-208ENST00000579040 LAMA2P24043 3122 aaKnown RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 GBF1Q92538 1859 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 TRIP12Q14669 1992 aaPredicted RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 OPLAHO14841 1288 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 EIF3JO75822 258 aaKnown RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 ARIH2O95376 493 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 CFBP00751 764 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 GH1P01241 217 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 ANTXR2P58335 489 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 PTPN11Q06124 597 aaPredicted RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 TROAPQ12815 778 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 NFRKBQ6P4R8 1299 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 CATIPQ7Z7H3 387 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 MB21D2Q8IYB1 491 aaPredicted RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 COPS5Q92905 334 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
SSH2-208ENST00000579040 SEMA6BQ9H3T3 888 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 TAF6LQ9Y6J9 622 aa13.4□□□□□ -0.26
SSH2-208ENST00000579040 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 NR3C2P08235 984 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
SSH2-208ENST00000579040 SLC35G1Q2M3R5 365 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 HERVK_113Q902F9 699 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 FAM161BQ96MY7 647 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
SSH2-208ENST00000579040 DDAH1O94760 285 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 DNAJB2P25686 324 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 KIF5BP33176 963 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 ARHGAP1Q07960 439 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 NBPF20Q3BBV1 942 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 BMP2KLQ5H9B9 411 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 KCNV1Q6PIU1 500 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 CHST3Q7LGC8 479 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 TMTC2Q8N394 836 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 EMID1Q96A84 441 aaPredicted RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 PIGSQ96S52 555 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 PDCD2LQ9BRP1 358 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 LSG1Q9H089 658 aaKnown RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 WNT8AQ9H1J5 351 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
SSH2-208ENST00000579040 COL6A3P12111 3177 aa13.38□□□□□ -0.27
SSH2-208ENST00000579040 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
SSH2-208ENST00000579040 CYTH3O43739 400 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms