RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 ICA1Q05084 483 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 CTC1Q2NKJ3 1217 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 SIAH1Q8IUQ4 282 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 SH2B1Q9NRF2 756 aaPredicted RBP10.58□□□□□ -0.72
SNX11-205ENST00000578861 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 ZNF214Q9UL59 606 aaPredicted RBP10.58□□□□□ -0.72
SNX11-205ENST00000578861 GNEQ9Y223 722 aaKnown RBP10.58□□□□□ -0.72
SNX11-205ENST00000578861 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 RIPK3Q9Y572 518 aa10.58□□□□□ -0.72
SNX11-205ENST00000578861 CTDP1Q9Y5B0 961 aaPredicted RBP10.58□□□□□ -0.72
SNX11-205ENST00000578861 MCM3APO60318 1980 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 ABHD14A-ACY1A0A1B0GW23 586 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 USP17L21D6R901 530 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 WDR46O15213 610 aaKnown RBP10.57□□□□□ -0.72
SNX11-205ENST00000578861 ADD2P35612 726 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 CDK8P49336 464 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 IKBKEQ14164 716 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 RSPO4Q2I0M5 234 aaPredicted RBP10.57□□□□□ -0.72
SNX11-205ENST00000578861 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 RPAP2Q8IXW5 612 aaPredicted RBP10.57□□□□□ -0.72
SNX11-205ENST00000578861 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 TEX13BQ9BXU2 312 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNX11-205ENST00000578861 VCPKMTQ9H867 229 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 PDGFCQ9NRA1 345 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 ATP8A2Q9NTI2 1148 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 ADAMTS5Q9UNA0 930 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
SNX11-205ENST00000578861 DDX49Q9Y6V7 483 aaKnown RBP10.57□□□□□ -0.72
SNX11-205ENST00000578861 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 LMNAP02545 664 aaKnown RBP10.56□□□□□ -0.72
SNX11-205ENST00000578861 MS4A1P11836 297 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 EEF2P13639 858 aaKnown RBP10.56□□□□□ -0.72
SNX11-205ENST00000578861 CNTN2Q02246 1040 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 PTPN21Q16825 1174 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 TCTN1Q2MV58 587 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 C12orf60Q5U649 245 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.56□□□□□ -0.72
SNX11-205ENST00000578861 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 DDRGK1Q96HY6 314 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 YME1L1Q96TA2 773 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 KATNBL1Q9H079 304 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 MFSD1Q9H3U5 465 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 SH2D4AQ9H788 454 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 DLL3Q9NYJ7 618 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 PPP1R9AQ9ULJ8 1098 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 SLC4A4Q9Y6R1 1079 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 VPS13AQ96RL7 3174 aa10.56□□□□□ -0.72
SNX11-205ENST00000578861 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 KMT2EQ8IZD2 1858 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 SMARCA5O60264 1052 aaPredicted RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 UPP2O95045 317 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 ATP5JP18859 108 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 SP100P23497 879 aaPredicted RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 ICAM3P32942 547 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 RRP1P56182 461 aaKnown RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 FAM83BQ5T0W9 1011 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 FGD4Q96M96 766 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 HAUS7Q99871 368 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 MTG1Q9BT17 334 aaPredicted RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 ZBTB40Q9NUA8 1239 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 DDX19BQ9UMR2 479 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 DMXL1Q9Y485 3027 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
SNX11-205ENST00000578861 MAP1BP46821 2468 aaKnown RBP10.55□□□□□ -0.72
SNX11-205ENST00000578861 EFCAB14O75071 495 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 AMHP03971 560 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 SELPP16109 830 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 PURAQ00577 322 aaKnown RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 GPNMBQ14956 572 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 PTGISQ16647 500 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 ASTLQ6HA08 431 aaPredicted RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 C16orf86Q6ZW13 317 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 FBXO16Q8IX29 292 aaPredicted RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 REPS2Q8NFH8 660 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 AFAP1L1Q8TED9 768 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 PHF7Q9BWX1 381 aaPredicted RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 KANSL2Q9H9L4 492 aa10.54□□□□□ -0.72
SNX11-205ENST00000578861 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
SNX11-205ENST00000578861 USP15Q9Y4E8 981 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms