RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CHST3Q7LGC8 479 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 SLC17A8Q8NDX2 589 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 COPS5Q92905 334 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 MTMR8Q96EF0 704 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 IWS1Q96ST2 819 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 RMDN3Q96TC7 470 aa18.48■□□□□ 0.55
CRLF3-203ENST00000578692 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.48■□□□□ 0.55
CRLF3-203ENST00000578692 B4GALT4O60513 344 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 CFBP00751 764 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 CYP2C18P33260 490 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 GRM4Q14833 912 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 STXBP2Q15833 593 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 STOX1Q6ZVD7 989 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 C16orf59Q7L2K0 433 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 MTG1Q9BT17 334 aaPredicted RBP18.47■□□□□ 0.55
CRLF3-203ENST00000578692 TRPV6Q9H1D0 765 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 SEMA6BQ9H3T3 888 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 SENP2Q9HC62 589 aa18.47■□□□□ 0.55
CRLF3-203ENST00000578692 RBM8AQ9Y5S9 174 aaKnown RBP18.47■□□□□ 0.55
CRLF3-203ENST00000578692 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-203ENST00000578692 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.46■□□□□ 0.55
CRLF3-203ENST00000578692 A6NJR5 290 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 KPNA6O60684 536 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 ARIH2O95376 493 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 ARHGEF16Q5VV41 709 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 SEPT14Q6ZU15 432 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 GUCD1Q96NT3 240 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 HIPK3Q9H422 1215 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 RIOX1Q9H6W3 641 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 MAP3K20Q9NYL2 800 aaKnown RBP18.46■□□□□ 0.55
CRLF3-203ENST00000578692 PCDHA1Q9Y5I3 950 aa18.46■□□□□ 0.55
CRLF3-203ENST00000578692 PPP1R11O60927 126 aaPredicted RBP18.45■□□□□ 0.54
CRLF3-203ENST00000578692 ACRP10323 421 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 TROAPQ12815 778 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 TRAF1Q13077 416 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 CCDC62Q6P9F0 684 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 HOMER1Q86YM7 354 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
CRLF3-203ENST00000578692 ALDH8A1Q9H2A2 487 aaPredicted RBP18.45■□□□□ 0.54
CRLF3-203ENST00000578692 OPLAHO14841 1288 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 EIF2AK2P19525 551 aaKnown RBP18.44■□□□□ 0.54
CRLF3-203ENST00000578692 HSD17B4P51659 736 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 ANTXR2P58335 489 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 MB21D2Q8IYB1 491 aaPredicted RBP18.44■□□□□ 0.54
CRLF3-203ENST00000578692 SAMD3Q8N6K7 520 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 PIGSQ96S52 555 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 PXMP2Q9NR77 195 aa18.44■□□□□ 0.54
CRLF3-203ENST00000578692 UMODL1Q5DID0 1318 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 EIF3JO75822 258 aaKnown RBP18.43■□□□□ 0.54
CRLF3-203ENST00000578692 NR3C2P08235 984 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 CCL23P55773 120 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 GHRHRQ02643 423 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 SLC35G1Q2M3R5 365 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 NBPF20Q3BBV1 942 aa18.43■□□□□ 0.54
CRLF3-203ENST00000578692 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
CRLF3-203ENST00000578692 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
CRLF3-203ENST00000578692 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
CRLF3-203ENST00000578692 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
CRLF3-203ENST00000578692 PNMA6FA0A0J9YX94 578 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 CYTH3O43739 400 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 GH1P01241 217 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 FGBP02675 491 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 FAM47CQ5HY64 1035 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 CDX2Q99626 313 aaPredicted RBP18.42■□□□□ 0.54
CRLF3-203ENST00000578692 ESYT1Q9BSJ8 1104 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 TTYH1Q9H313 450 aaPredicted RBP18.42■□□□□ 0.54
CRLF3-203ENST00000578692 TRMT13Q9NUP7 481 aaKnown RBP18.42■□□□□ 0.54
CRLF3-203ENST00000578692 COL6A3P12111 3177 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 KIAA1217Q5T5P2 1943 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 RASIP1Q5U651 963 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 AFG1LQ8WV93 481 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 MTA3Q9BTC8 594 aa18.42■□□□□ 0.54
CRLF3-203ENST00000578692 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
CRLF3-203ENST00000578692 TMEM265A0A087WTH1 108 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 CYP2C9P11712 490 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 MYCLP12524 364 aaPredicted RBP18.41■□□□□ 0.54
CRLF3-203ENST00000578692 HOXA13P31271 388 aaPredicted RBP18.41■□□□□ 0.54
CRLF3-203ENST00000578692 PTPN11Q06124 597 aaPredicted RBP18.41■□□□□ 0.54
CRLF3-203ENST00000578692 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 CENPQQ7L2Z9 268 aaPredicted RBP18.41■□□□□ 0.54
CRLF3-203ENST00000578692 RPUSD2Q8IZ73 545 aaKnown RBP18.41■□□□□ 0.54
CRLF3-203ENST00000578692 TMTC2Q8N394 836 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 MAP3K14Q99558 947 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 PDCD2LQ9BRP1 358 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
CRLF3-203ENST00000578692 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
CRLF3-203ENST00000578692 SLC27A2O14975 620 aa18.4■□□□□ 0.54
CRLF3-203ENST00000578692 PRC1O43663 620 aa18.4■□□□□ 0.54
CRLF3-203ENST00000578692 MMP3P08254 477 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms