RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 TUBE1Q9UJT0 475 aa19.16■□□□□ 0.66
SREBF1-218ENST00000578469 MRPL11Q9Y3B7 192 aaKnown RBP19.16■□□□□ 0.66
SREBF1-218ENST00000578469 RBBP6Q7Z6E9 1792 aaKnown RBP19.15■□□□□ 0.66
SREBF1-218ENST00000578469 SPDYE3A6NKU9 549 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 ACTN4O43707 911 aaKnown RBP19.15■□□□□ 0.66
SREBF1-218ENST00000578469 SMC2O95347 1197 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 UBA7P41226 1012 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 USP11P51784 963 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 POSTNQ15063 836 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 CALCRLQ16602 461 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 TMEM266Q2M3C6 531 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 ANKRD13AQ8IZ07 590 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
SREBF1-218ENST00000578469 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 ANO3Q9BYT9 981 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 EFCC1Q9HA90 598 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 CCDC39Q9UFE4 941 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 PNMA2Q9UL42 364 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 ABCB11O95342 1321 aa19.15■□□□□ 0.66
SREBF1-218ENST00000578469 KIAA0100Q14667 2235 aaKnown RBP19.15■□□□□ 0.66
SREBF1-218ENST00000578469 DOCK1Q14185 1865 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L15C9J2P7 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L13C9JLJ4 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L11C9JVI0 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L18D6R9N7 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L22D6RA61 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L17D6RBQ6 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L19D6RCP7 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L20D6RJB6 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 GOLGA6L19H0YKK7 550 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 PTPRAP18433 802 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L24Q0WX57 530 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 CRHR2Q13324 411 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 PNOCQ13519 176 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 ARHGEF6Q15052 776 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 HABP4Q5JVS0 413 aaKnown RBP19.14■□□□□ 0.65
SREBF1-218ENST00000578469 NOL9Q5SY16 702 aaKnown RBP19.14■□□□□ 0.65
SREBF1-218ENST00000578469 USP17L6PQ6QN14 398 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 ZNF280CQ8ND82 737 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 CD99L2Q8TCZ2 262 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 ERCC4Q92889 916 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-218ENST00000578469 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 RAB34Q9BZG1 259 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 CCSER1Q9C0I3 900 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 PTPN22Q9Y2R2 807 aa19.14■□□□□ 0.65
SREBF1-218ENST00000578469 CTDP1Q9Y5B0 961 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-218ENST00000578469 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 C19orf81C9J6K1 198 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 PIK3CDO00329 1044 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 MEIS2O14770 477 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 MARCH6O60337 910 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 FDX1P10109 184 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-218ENST00000578469 SP3Q02447 781 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 SPP2Q13103 211 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 MTMR2Q13614 643 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-218ENST00000578469 MOXD1Q6UVY6 613 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 ZKSCAN4Q969J2 545 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-218ENST00000578469 TANGO6Q9C0B7 1094 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
SREBF1-218ENST00000578469 DDX25Q9UHL0 483 aaKnown RBP19.13■□□□□ 0.65
SREBF1-218ENST00000578469 BECN2A8MW95 431 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 TDP2O95551 362 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 BACE1P56817 501 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 ARMC5Q96C12 935 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 TMEM106CQ9BVX2 250 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 PCDHA5Q9Y5H7 936 aa19.12■□□□□ 0.65
SREBF1-218ENST00000578469 A0A087X0B3 334 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 GCOM1H8Y6P7 765 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 BIN1O00499 593 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 ICAM1P05362 532 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 POLR2MP0CAP2 368 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 STAT6P42226 847 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 TXKP42681 527 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 RRAGBQ5VZM2 374 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 C11orf57Q6ZUT1 292 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 TRIML1Q8N9V2 468 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 TRIM44Q96DX7 344 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 PAGE5Q96GU1 130 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 BPIFA3Q9BQP9 254 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 RPAP3Q9H6T3 665 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 EMILIN3Q9NT22 766 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 TMOD4Q9NZQ9 345 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 ZHX2Q9Y6X8 837 aa19.11■□□□□ 0.65
SREBF1-218ENST00000578469 MKI67P46013 3256 aaKnown RBP19.11■□□□□ 0.65
SREBF1-218ENST00000578469 CYP3A7-CYP3A51PA0A087WV96 503 aa19.1■□□□□ 0.65
SREBF1-218ENST00000578469 ZBED4O75132 1171 aa19.1■□□□□ 0.65
SREBF1-218ENST00000578469 USP2O75604 605 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-218ENST00000578469 FLOT1O75955 427 aa19.1■□□□□ 0.65
SREBF1-218ENST00000578469 VCAM1P19320 739 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms