RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 SHCBP1Q8NEM2 672 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 SMCR8Q8TEV9 937 aaPredicted RBP15.26■□□□□ 0.03
SRSF1-202ENST00000578430 CRYGNQ8WXF5 182 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 HOMER2Q9NSB8 354 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 RBPJLQ9UBG7 517 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 SMCHD1A6NHR9 2005 aa15.26■□□□□ 0.03
SRSF1-202ENST00000578430 PFASO15067 1338 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 CYP3A7-CYP3A51PA0A087WV96 503 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 FAM155AB1AL88 458 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-202ENST00000578430 CUTAO60888 179 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 CNMDO75829 334 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 TAL1P17542 331 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PTPREP23469 700 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 CYP3A7P24462 503 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-202ENST00000578430 CIITAP33076 1130 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 MCM7P33993 719 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PRPHP41219 470 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PTGDRQ13258 359 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 NBR1Q14596 966 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 POTEEQ6S8J3 1075 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
SRSF1-202ENST00000578430 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PTPN18Q99952 460 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 MROH8Q9H579 483 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 MORF4L1Q9UBU8 362 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 PCDHA7Q9UN72 937 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 SRPRBQ9Y5M8 271 aaKnown RBP15.25■□□□□ 0.03
SRSF1-202ENST00000578430 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
SRSF1-202ENST00000578430 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 NEMFO60524 1076 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 CCNT1O60563 726 aaKnown RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 RPS6P62753 249 aaKnown RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 ERVK-24P63145 666 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 MAP2K1Q02750 393 aaPredicted RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 XRRA1Q6P2D8 792 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 GPRC5AQ8NFJ5 357 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 PGBD1Q96JS3 809 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 MBOAT7Q96N66 472 aa15.24■□□□□ 0.03
SRSF1-202ENST00000578430 MOV10L1Q9BXT6 1211 aaKnown RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 DDX49Q9Y6V7 483 aaKnown RBP15.24■□□□□ 0.03
SRSF1-202ENST00000578430 RPTORQ8N122 1335 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 WNT7AO00755 349 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 TRAK2O60296 914 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-202ENST00000578430 CYP2C8P10632 490 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 TM4SF4P48230 202 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 NOGQ13253 232 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 GRM1Q13255 1194 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 BAATQ14032 418 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-202ENST00000578430 PAXIP1Q6ZW49 1069 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-202ENST00000578430 C4orf32Q8N8J7 132 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 TXNRD2Q9NNW7 524 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 A1CFQ9NQ94 594 aaKnown RBP15.23■□□□□ 0.03
SRSF1-202ENST00000578430 CYP39A1Q9NYL5 469 aa15.23■□□□□ 0.03
SRSF1-202ENST00000578430 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-202ENST00000578430 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 TBX3O15119 743 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 EDIL3O43854 480 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 OR52Z1P0C646 297 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 CMA1P23946 247 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 MARCKSP29966 332 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-202ENST00000578430 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 Q4G0T1 1027 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-202ENST00000578430 CYP4F22Q6NT55 531 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 SLC30A10Q6XR72 485 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 NCAPG2Q86XI2 1143 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 DNERQ8NFT8 737 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 ABHD8Q96I13 439 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 CAPNS2Q96L46 248 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
SRSF1-202ENST00000578430 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
SRSF1-202ENST00000578430 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
SRSF1-202ENST00000578430 ALDH1A1P00352 501 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 ERCC3P19447 782 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 ZNF76P36508 570 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 LONP1P36776 959 aaKnown RBP15.21■□□□□ 0.03
SRSF1-202ENST00000578430 CALCRLQ16602 461 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.03
SRSF1-202ENST00000578430 NSUN6Q8TEA1 469 aaKnown RBP15.21■□□□□ 0.03
SRSF1-202ENST00000578430 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
SRSF1-202ENST00000578430 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms