RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 H7C1D1 291 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 PMS1P54277 932 aaKnown RBP12.77□□□□□ -0.36
GGA3-205ENST00000578348 ZNF543Q08ER8 600 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 ORC2Q13416 577 aaPredicted RBP12.77□□□□□ -0.36
GGA3-205ENST00000578348 DTHD1Q6ZMT9 781 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 NOA1Q8NC60 698 aaKnown RBP12.77□□□□□ -0.36
GGA3-205ENST00000578348 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 TSPYL1Q9H0U9 437 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.36
GGA3-205ENST00000578348 REXO2Q9Y3B8 237 aaKnown RBP12.77□□□□□ -0.36
GGA3-205ENST00000578348 ENC1O14682 589 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 TUBB4BP68371 445 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 ADSSL1Q8N142 457 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 MB21D1Q8N884 522 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 VAT1LQ9HCJ6 419 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
GGA3-205ENST00000578348 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
GGA3-205ENST00000578348 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 AMPD2Q01433 879 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 AOC3Q16853 763 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 NAALADL2Q58DX5 795 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 EXOC4Q96A65 974 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 LUC7L2Q9Y383 392 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 PSME4Q14997 1843 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 LGALS16A8MUM7 142 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 RBM5P52756 815 aaKnown RBP eCLIP12.76□□□□□ -0.375e-10■■■■□ 19.6
GGA3-205ENST00000578348 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 NEK8Q86SG6 692 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 REXO1Q8N1G1 1221 aaKnown RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 TMEM60Q9H2L4 133 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
GGA3-205ENST00000578348 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
GGA3-205ENST00000578348 COL2A1P02458 1487 aaPredicted RBP12.75□□□□□ -0.37
GGA3-205ENST00000578348 TULP2O00295 520 aa12.75□□□□□ -0.37
GGA3-205ENST00000578348 MPHOSPH10O00566 681 aaKnown RBP12.75□□□□□ -0.37
GGA3-205ENST00000578348 CASP8Q14790 479 aa12.75□□□□□ -0.37
GGA3-205ENST00000578348 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
GGA3-205ENST00000578348 ZFPM1Q8IX07 1006 aa12.75□□□□□ -0.37
GGA3-205ENST00000578348 CCSER1Q9C0I3 900 aa12.75□□□□□ -0.37
GGA3-205ENST00000578348 GPCPD1Q9NPB8 672 aa12.75□□□□□ -0.37
GGA3-205ENST00000578348 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 EEF1GP26641 437 aaKnown RBP12.74□□□□□ -0.37
GGA3-205ENST00000578348 UBA7P41226 1012 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 ADCY7P51828 1080 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 AK8Q96MA6 479 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 DNAJC18Q9H819 358 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
GGA3-205ENST00000578348 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 B4DLN1 442 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 PSMA7O14818 248 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
GGA3-205ENST00000578348 HERVK_113P62684 666 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 STIM1Q13586 685 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 ZNF507Q8TCN5 953 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
GGA3-205ENST00000578348 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
GGA3-205ENST00000578348 A0A1W2PQC6 194 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
GGA3-205ENST00000578348 PSMD14O00487 310 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 KLRC4O43908 158 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 PHACTR2O75167 634 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 CACNB3P54284 484 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 TCP10Q12799 353 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 LETM2Q2VYF4 491 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 TRAPPC11Q7Z392 1133 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 ADGRF4Q8IZF3 695 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 MKL1Q969V6 931 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 THAP9Q9H5L6 903 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
GGA3-205ENST00000578348 MAGEF1Q9HAY2 307 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms