RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 PRPHP41219 470 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 SNRNP48Q6IEG0 339 aaKnown RBP14.9□□□□□ -0.02
CTC1-203ENST00000578240 LBX2Q6XYB7 198 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 EPSTI1Q96J88 318 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 FUCA2Q9BTY2 467 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
CTC1-203ENST00000578240 NUP62CLQ9H1M0 184 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 RNF146Q9NTX7 359 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 TLL2Q9Y6L7 1015 aa14.9□□□□□ -0.02
CTC1-203ENST00000578240 CYP3A7-CYP3A51PA0A087WV96 503 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
CTC1-203ENST00000578240 FOSP01100 380 aaPredicted RBP14.89□□□□□ -0.03
CTC1-203ENST00000578240 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 CYP3A7P24462 503 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 CAMK4Q16566 473 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 MOXD1Q6UVY6 613 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 FCHSD1Q86WN1 690 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 SYMPKQ92797 1274 aaKnown RBP14.89□□□□□ -0.03
CTC1-203ENST00000578240 HAS1Q92839 578 aa14.89□□□□□ -0.03
CTC1-203ENST00000578240 SYAP1Q96A49 352 aaPredicted RBP14.89□□□□□ -0.03
CTC1-203ENST00000578240 ARID2Q68CP9 1835 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 IGLV3-22A0A075B6J6 115 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 SPDYE3A6NKU9 549 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 PP2D1A8MPX8 630 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 FAM86B1E9PN63 330 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 LAD1O00515 517 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 FAM86B2P0C5J1 330 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 GSE1Q14687 1217 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 IL31RAQ8NI17 732 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 GJA10Q969M2 543 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 SLC10A4Q96EP9 437 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 TRERF1Q96PN7 1200 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 TEX13BQ9BXU2 312 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 R3HDMLQ9H3Y0 253 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
CTC1-203ENST00000578240 ZSWIM8A7E2V4 1837 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 ZNF202O95125 648 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 CYP3A4P08684 503 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 GCFC2P16383 781 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 CIITAP33076 1130 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 USP11P51784 963 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 HERVK_113P62684 666 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 RPS6P62753 249 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 UBXN2AP68543 259 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 SNAPC2Q13487 334 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 C2orf69Q8N8R5 385 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 SYTL5Q8TDW5 730 aaPredicted RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 BRI3BPQ8WY22 251 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 CAPNS2Q96L46 248 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 KCNMB3Q9NPA1 279 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 HOXC10Q9NYD6 342 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 DDX25Q9UHL0 483 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 KCNH3Q9ULD8 1083 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 PCNTO95613 3336 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 ACTN4O43707 911 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 CDC25AP30304 524 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 SYKP43405 635 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 MKRN3Q13064 507 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 GRM1Q13255 1194 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 SPRYD7Q5W111 196 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 LRSAM1Q6UWE0 723 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 IGSF22Q8N9C0 903 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 ETNPPLQ8TBG4 499 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 LRRC15Q8TF66 581 aa14.87□□□□□ -0.03
CTC1-203ENST00000578240 PURBQ96QR8 312 aaKnown RBP14.87□□□□□ -0.03
CTC1-203ENST00000578240 MYH9P35579 1960 aaKnown RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 MYH11P35749 1972 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 KINO60870 393 aaKnown RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 LONP1P36776 959 aaKnown RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 E2F4Q16254 413 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 CALCRLQ16602 461 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 CYP4F22Q6NT55 531 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 FASTKD5Q7L8L6 764 aaKnown RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 ERCC4Q92889 916 aaPredicted RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 TNMDQ9H2S6 317 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 A1CFQ9NQ94 594 aaKnown RBP14.86□□□□□ -0.03
CTC1-203ENST00000578240 PNMA2Q9UL42 364 aa14.86□□□□□ -0.03
CTC1-203ENST00000578240 ASTN1O14525 1302 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 FOXN1O15353 648 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 ZBTB48P10074 688 aaPredicted RBP14.85□□□□□ -0.03
CTC1-203ENST00000578240 STAT3P40763 770 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 FXR2P51116 673 aaKnown RBP eCLIP14.85□□□□□ -0.03
CTC1-203ENST00000578240 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 LONRF3Q496Y0 759 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 Q4G0T1 1027 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 DTHD1Q6ZMT9 781 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 MCF2L2Q86YR7 1114 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 HHIPL1Q96JK4 782 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 TIGD1Q96MW7 591 aa14.85□□□□□ -0.03
CTC1-203ENST00000578240 MMTAG2Q9BU76 263 aaKnown RBP14.85□□□□□ -0.03
CTC1-203ENST00000578240 CTDP1Q9Y5B0 961 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms