RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 HSPD1P10809 573 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 NBPF20Q3BBV1 942 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 UHRF1Q96T88 793 aaPredicted RBP13.17□□□□□ -0.3
SMARCE1-214ENST00000578112 NMT2O60551 498 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 ZBBXA8MT70 800 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 TXNP10599 105 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 EEPD1Q7L9B9 569 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
SMARCE1-214ENST00000578112 CXCL10P02778 98 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 IGFBP4P22692 258 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 CALML3P27482 149 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 CNKSR3Q6P9H4 555 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 OSBPL3Q9H4L5 887 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 TOMM22Q9NS69 142 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 HOXD8P13378 290 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 STXBP2Q15833 593 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 MTCH2Q9Y6C9 303 aa13.15□□□□□ -0.3
SMARCE1-214ENST00000578112 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 MMP3P08254 477 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 SELPP16109 830 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 SLC16A2P36021 539 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 KCNJ6P48051 423 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 SNAP25P60880 206 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 SCLYQ96I15 445 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 NOD1Q9Y239 953 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 CAND2O75155 1236 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 BMP1P13497 986 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 PTK7Q13308 1070 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
SMARCE1-214ENST00000578112 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 ZNF213O14771 459 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 CYP2C9P11712 490 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 DGKDQ16760 1214 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 FAM47CQ5HY64 1035 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 KRT23Q9C075 422 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 COL9A1P20849 921 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 PTGISQ16647 500 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 SYTL5Q8TDW5 730 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 GTF2IRD1Q9UHL9 959 aa13.13□□□□□ -0.31
SMARCE1-214ENST00000578112 HAS3O00219 553 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 CA3P07451 260 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 RABGGTBP53611 331 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 TAP1Q03518 808 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 PPTC7Q8NI37 304 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 HSD17B4P51659 736 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCE1-214ENST00000578112 SCN5AQ14524 2016 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 STAM2O75886 525 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 TGFB3P10600 412 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 SDSP20132 328 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 PUS10Q3MIT2 529 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 FBXO11Q86XK2 927 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 SMC5Q8IY18 1101 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-214ENST00000578112 SIP14410 1827 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 F2P00734 622 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 PARP1P09874 1014 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 PSEN2P49810 448 aa13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 WDR5P61964 334 aaKnown RBP13.1□□□□□ -0.31
SMARCE1-214ENST00000578112 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms