RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 C16orf59Q7L2K0 433 aa17.42■□□□□ 0.38
RN7SL560P-201ENST00000577943 COPS5Q92905 334 aa17.42■□□□□ 0.38
RN7SL560P-201ENST00000577943 TRPV6Q9H1D0 765 aa17.42■□□□□ 0.38
RN7SL560P-201ENST00000577943 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
RN7SL560P-201ENST00000577943 MRPL11Q9Y3B7 192 aaKnown RBP17.42■□□□□ 0.38
RN7SL560P-201ENST00000577943 TMEM265A0A087WTH1 108 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 DNAJB2P25686 324 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 CHMLP26374 656 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 SEC23AQ15436 765 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 STAG2Q8N3U4 1231 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 MYLIPQ8WY64 445 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 TAAR1Q96RJ0 339 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 MTG1Q9BT17 334 aaPredicted RBP17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 IL23AQ9NPF7 189 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 UMODL1Q5DID0 1318 aa17.41■□□□□ 0.38
RN7SL560P-201ENST00000577943 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 CYP21A2P08686 494 aa17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 CCL23P55773 120 aa17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 PTH1RQ03431 593 aa17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 PRUNE2Q8WUY3 3088 aa17.4■□□□□ 0.38
RN7SL560P-201ENST00000577943 ERICH2A1L162 156 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 IFIT3O14879 490 aaKnown RBP17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 KPNA6O60684 536 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 ARIH2O95376 493 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 CFBP00751 764 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 FGBP02675 491 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 SUPT20HL2P0C7V6 817 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 STXBP2Q15833 593 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 ARHGEF16Q5VV41 709 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 SEPT14Q6ZU15 432 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 RALYLQ86SE5 291 aaKnown RBP17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 IWS1Q96ST2 819 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 RMDN3Q96TC7 470 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 AMNQ9BXJ7 453 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 TRMT13Q9NUP7 481 aaKnown RBP17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 COL20A1Q9P218 1284 aa17.39■□□□□ 0.37
RN7SL560P-201ENST00000577943 A6NJR5 290 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 FOSL2P15408 326 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 RASIP1Q5U651 963 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 MAFAQ8NHW3 353 aaPredicted RBP17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 HERVK_113Q902F9 699 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 TIFAQ96CG3 184 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 WNT8AQ9H1J5 351 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
RN7SL560P-201ENST00000577943 GRXCR1A8MXD5 290 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 ZBTB5O15062 677 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 CYP2C9P11712 490 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 EIF2AK2P19525 551 aaKnown RBP17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 LY6KQ17RY6 165 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 SCLYQ96I15 445 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 PBX4Q9BYU1 374 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 ZNF576Q9H609 170 aa17.37■□□□□ 0.37
RN7SL560P-201ENST00000577943 TANC1Q9C0D5 1861 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 PALM3A6NDB9 673 aaPredicted RBP17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 E7EWF7 191 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 SGSM2O43147 1006 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 GH1P01241 217 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 WTAPQ15007 396 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 NFRKBQ6P4R8 1299 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 CCDC62Q6P9F0 684 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 OTOP2Q7RTS6 562 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 MTMR8Q96EF0 704 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 PXMP2Q9NR77 195 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 CXXC1Q9P0U4 656 aaPredicted RBP17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 TET1Q8NFU7 2136 aa17.36■□□□□ 0.37
RN7SL560P-201ENST00000577943 NR3C2P08235 984 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 PBX2P40425 430 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 HSD17B4P51659 736 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 GRM4Q14833 912 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 MAP3K20Q9NYL2 800 aaKnown RBP17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 MSRAQ9UJ68 235 aa17.35■□□□□ 0.37
RN7SL560P-201ENST00000577943 OPLAHO14841 1288 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 MMP3P08254 477 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 PTPN11Q06124 597 aaPredicted RBP17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 TRAF1Q13077 416 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 SAMD3Q8N6K7 520 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
RN7SL560P-201ENST00000577943 NOD1Q9Y239 953 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms