RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 TRPV1Q8NER1 839 aa20.55■□□□□ 0.88
CLDN7-208ENST00000575313 MORC4Q8TE76 937 aa20.55■□□□□ 0.88
CLDN7-208ENST00000575313 U2AF1L4Q8WU68 220 aaKnown RBP20.55■□□□□ 0.88
CLDN7-208ENST00000575313 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
CLDN7-208ENST00000575313 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 SEPT4O43236 478 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 SGPL1O95470 568 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
CLDN7-208ENST00000575313 PFKFB3Q16875 520 aaPredicted RBP20.54■□□□□ 0.88
CLDN7-208ENST00000575313 PRAMEF19Q5SWL8 479 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 WWC2Q6AWC2 1192 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 NSUN6Q8TEA1 469 aaKnown RBP20.54■□□□□ 0.88
CLDN7-208ENST00000575313 CUL5Q93034 780 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 ORC3Q9UBD5 711 aaPredicted RBP20.54■□□□□ 0.88
CLDN7-208ENST00000575313 CENPFP49454 3210 aa20.54■□□□□ 0.88
CLDN7-208ENST00000575313 LCTP09848 1927 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 ZNF865P0CJ78 1059 aaPredicted RBP20.53■□□□□ 0.88
CLDN7-208ENST00000575313 SCG2P13521 617 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
CLDN7-208ENST00000575313 GJB2P29033 226 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 NAPAP54920 295 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 ACVR2BQ13705 512 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 GPKOWQ92917 476 aaPredicted RBP eCLIP20.53■□□□□ 0.88
CLDN7-208ENST00000575313 IWS1Q96ST2 819 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 RMDN3Q96TC7 470 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 PSTPIP2Q9H939 334 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 BARHL2Q9NY43 387 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 COL20A1Q9P218 1284 aa20.53■□□□□ 0.88
CLDN7-208ENST00000575313 DDX20Q9UHI6 824 aaKnown RBP20.53■□□□□ 0.88
CLDN7-208ENST00000575313 ZHX1Q9UKY1 873 aaPredicted RBP20.53■□□□□ 0.88
CLDN7-208ENST00000575313 KIAA0100Q14667 2235 aaKnown RBP20.52■□□□□ 0.88
CLDN7-208ENST00000575313 EDNRBP24530 442 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 HOXA13P31271 388 aaPredicted RBP20.52■□□□□ 0.88
CLDN7-208ENST00000575313 PDE4DQ08499 809 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.88
CLDN7-208ENST00000575313 TAAR1Q96RJ0 339 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 GLT8D2Q9H1C3 349 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 VTA1Q9NP79 307 aa20.52■□□□□ 0.88
CLDN7-208ENST00000575313 STK36Q9NRP7 1315 aa20.52■□□□□ 0.87
CLDN7-208ENST00000575313 STXBP3O00186 592 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 DEXIO95424 95 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 TFRCP02786 760 aaKnown RBP20.51■□□□□ 0.87
CLDN7-208ENST00000575313 AKR1A1P14550 325 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 PKN1Q16512 942 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 ARHGEF16Q5VV41 709 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 LHX8Q68G74 356 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 KATNBL1Q9H079 304 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
CLDN7-208ENST00000575313 EN2P19622 333 aaPredicted RBP20.5■□□□□ 0.87
CLDN7-208ENST00000575313 FCHSD1Q86WN1 690 aa20.5■□□□□ 0.87
CLDN7-208ENST00000575313 OGDHLQ9ULD0 1010 aa20.5■□□□□ 0.87
CLDN7-208ENST00000575313 MEIS2O14770 477 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 RARBP10826 455 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 EIF2AK2P19525 551 aaKnown RBP20.49■□□□□ 0.87
CLDN7-208ENST00000575313 ADCY7P51828 1080 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 TYW1BQ6NUM6 668 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 ANKLE1Q8NAG6 615 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 WASF1Q92558 559 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 SHISA4Q96DD7 197 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 RIC8AQ9NPQ8 531 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
CLDN7-208ENST00000575313 MCM3APO60318 1980 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 ESYT2A0FGR8 921 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 SMCO2A6NFE2 343 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 STXBP2Q15833 593 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 CCDC144BQ3MJ40 725 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 EEPD1Q7L9B9 569 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
CLDN7-208ENST00000575313 CCDC148Q8NFR7 591 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 AIFM3Q96NN9 605 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 PDCD2LQ9BRP1 358 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 ALG1Q9BT22 464 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 SH3GLB2Q9NR46 395 aa20.48■□□□□ 0.87
CLDN7-208ENST00000575313 SPDYE3A6NKU9 549 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 NR3C2P08235 984 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 IQSEC1Q6DN90 963 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 FAM177A1Q8N128 213 aaPredicted RBP20.47■□□□□ 0.87
CLDN7-208ENST00000575313 C6orf50Q9HD87 102 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 DDX49Q9Y6V7 483 aaKnown RBP20.47■□□□□ 0.87
CLDN7-208ENST00000575313 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 LRRC37A2A6NM11 1700 aa20.47■□□□□ 0.87
CLDN7-208ENST00000575313 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
CLDN7-208ENST00000575313 GNA11P29992 359 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 RGS19P49795 217 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 PGM5Q15124 567 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
CLDN7-208ENST00000575313 MCTP2Q6DN12 878 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 ARRDC4Q8NCT1 418 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 ZMYND12Q9H0C1 365 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 EHMT1Q9H9B1 1298 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 XPNPEP3Q9NQH7 507 aa20.46■□□□□ 0.87
CLDN7-208ENST00000575313 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
CLDN7-208ENST00000575313 DUSP11O75319 330 aaKnown RBP20.45■□□□□ 0.86
CLDN7-208ENST00000575313 FOSP01100 380 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms