RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
SMG6-216ENST00000575176 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
SMG6-216ENST00000575176 MRPS9P82933 396 aaKnown RBP10.06□□□□□ -0.8
SMG6-216ENST00000575176 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 PKN1Q16512 942 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 WWC2Q6AWC2 1192 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 TLK2Q86UE8 772 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
SMG6-216ENST00000575176 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
SMG6-216ENST00000575176 BRF1Q92994 677 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 KIF2CQ99661 725 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 FAM184BQ9ULE4 1060 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 MRPL11Q9Y3B7 192 aaKnown RBP10.06□□□□□ -0.8
SMG6-216ENST00000575176 SLC12A7Q9Y666 1083 aa10.06□□□□□ -0.8
SMG6-216ENST00000575176 ZBTB43O43298 467 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
SMG6-216ENST00000575176 CALM1P0DP23 149 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 CALM2P0DP24 149 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 CALM3P0DP25 149 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
SMG6-216ENST00000575176 ITGB8P26012 769 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 KIF5BP33176 963 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 ACLYP53396 1101 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 BEX3Q00994 111 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 PGM5Q15124 567 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 RUFY3Q7L099 469 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 SLC43A3Q8NBI5 491 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 COPS5Q92905 334 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 GDF15Q99988 308 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
SMG6-216ENST00000575176 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
SMG6-216ENST00000575176 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
SMG6-216ENST00000575176 ADD3Q9UEY8 706 aaKnown RBP10.05□□□□□ -0.8
SMG6-216ENST00000575176 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 GOLGA8AA7E2F4 631 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 STXBP3O00186 592 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 EDIL3O43854 480 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 DHX16O60231 1041 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 CFBP00751 764 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 ASGR1P07306 291 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 ADD1P35611 737 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 CLK2P49760 499 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 CDK7P50613 346 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 RTP1P59025 263 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 NPY5RQ15761 445 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 KCNA10Q16322 511 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 RTN1Q16799 776 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 TRIM60Q495X7 471 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 SLC39A5Q6ZMH5 540 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 C7orf61Q8IZ16 206 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 SAMD3Q8N6K7 520 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 ARRDC4Q8NCT1 418 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 CRYGNQ8WXF5 182 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 PIBF1Q8WXW3 757 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 CTAGE1Q96RT6 745 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
SMG6-216ENST00000575176 Q9Y3F1 56 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 TET1Q8NFU7 2136 aa10.04□□□□□ -0.8
SMG6-216ENST00000575176 A6NJR5 290 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 KBTBD13C9JR72 458 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 RBAK-RBAKDNI3L0D1 243 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 LARGE1O95461 756 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 NR3C2P08235 984 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 GNAQP50148 359 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 ATN1P54259 1190 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 ANAPC15P60006 121 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 SP2Q02086 613 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 UBE2SQ16763 222 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 ANKRD33Q7Z3H0 272 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 RNF180Q86T96 592 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 EMID1Q96A84 441 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
SMG6-216ENST00000575176 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
SMG6-216ENST00000575176 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms