RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 PCDHB12Q9Y5F1 795 aa6.2□□□□□ -1.42
TSR1-203ENST00000575049 SCINQ9Y6U3 715 aa6.2□□□□□ -1.42
TSR1-203ENST00000575049 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 CCER2I3L3R5 266 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 SHOXO15266 292 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 ZNF500O60304 480 aaPredicted RBP6.19□□□□□ -1.42
TSR1-203ENST00000575049 TP53P04637 393 aaPredicted RBP6.19□□□□□ -1.42
TSR1-203ENST00000575049 CPEP16870 476 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 LTKP29376 864 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 IRAK1P51617 712 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 PURAQ00577 322 aaKnown RBP6.19□□□□□ -1.42
TSR1-203ENST00000575049 ITKQ08881 620 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 DCAF15Q66K64 600 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 ERAP2Q6P179 960 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 LHFPL2Q6ZUX7 228 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 DAGLBQ8NCG7 672 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 CHMP4CQ96CF2 233 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 MTMR8Q96EF0 704 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 CLUHP3Q96NS8 147 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 YIPF4Q9BSR8 244 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 PAGR1Q9BTK6 254 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 RC3H2Q9HBD1 1191 aaKnown RBP6.19□□□□□ -1.42
TSR1-203ENST00000575049 NCOA5Q9HCD5 579 aaKnown RBP6.19□□□□□ -1.42
TSR1-203ENST00000575049 LZTS1Q9Y250 596 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 PCDHA11Q9Y5I1 949 aa6.19□□□□□ -1.42
TSR1-203ENST00000575049 PLD2O14939 933 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 SIGLEC6O43699 453 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 RFPL1O75677 317 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 PRAMEF1O95521 474 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 HSP90AA1P07900 732 aaKnown RBP6.18□□□□□ -1.42
TSR1-203ENST00000575049 IFIT2P09913 472 aaKnown RBP6.18□□□□□ -1.42
TSR1-203ENST00000575049 TRIM27P14373 513 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 EGR3Q06889 387 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 FNDC3BQ53EP0 1204 aaKnown RBP6.18□□□□□ -1.42
TSR1-203ENST00000575049 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 FAM83BQ5T0W9 1011 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 FOXB2Q5VYV0 432 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 LRRTM3Q86VH5 581 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 ZNF655Q8N720 491 aaPredicted RBP6.18□□□□□ -1.42
TSR1-203ENST00000575049 LRRN4CLQ8ND94 238 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 WDR66Q8TBY9 1149 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 KISS1RQ969F8 398 aaPredicted RBP6.18□□□□□ -1.42
TSR1-203ENST00000575049 GFOD1Q9NXC2 390 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 ZNF180Q9UJW8 692 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 PCDHB10Q9UN67 800 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 DAAM1Q9Y4D1 1078 aa6.18□□□□□ -1.42
TSR1-203ENST00000575049 L1CAMP32004 1257 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 SLC7A5Q01650 507 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 GNPTABQ3T906 1256 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 IL31Q6EBC2 164 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 ZBTB46Q86UZ6 589 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 KLHL6Q8WZ60 621 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 RUNDC1Q96C34 613 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 TCTN2Q96GX1 697 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 ALPK1Q96QP1 1244 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 TRIM8Q9BZR9 551 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 INO80BQ9C086 356 aaPredicted RBP6.17□□□□□ -1.42
TSR1-203ENST00000575049 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 OBP2AQ9NY56 170 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 MINPP1Q9UNW1 487 aa6.17□□□□□ -1.42
TSR1-203ENST00000575049 ABCC9O60706 1549 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 ZSCAN20P17040 1043 aaPredicted RBP6.16□□□□□ -1.42
TSR1-203ENST00000575049 SDSP20132 328 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 HTR3AP46098 478 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 TRAPPC10P48553 1259 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 NEK3P51956 506 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 STRN3Q13033 797 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 RNF219Q5W0B1 726 aaPredicted RBP6.16□□□□□ -1.42
TSR1-203ENST00000575049 ZNF280DQ6N043 979 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 VHLLQ6RSH7 139 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 LEO1Q8WVC0 666 aaPredicted RBP6.16□□□□□ -1.42
TSR1-203ENST00000575049 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
TSR1-203ENST00000575049 DDX1Q92499 740 aaKnown RBP6.16□□□□□ -1.42
TSR1-203ENST00000575049 RHOBTB2Q9BYZ6 727 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 ZHX3Q9H4I2 956 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 GP6Q9HCN6 339 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 PPP2R3BQ9Y5P8 575 aa6.16□□□□□ -1.42
TSR1-203ENST00000575049 FAM83GA6ND36 823 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 VSTM5A8MXK1 200 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 MEIS1O00470 390 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 GPR39O43194 453 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 CBFA2T2O43439 604 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 ABLIM3O94929 683 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 CD247P20963 164 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 ZNF445P59923 1031 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 TEKQ02763 1124 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 STAT4Q14765 748 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 RALGPS1Q5JS13 557 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 KIAA1211LQ6NV74 962 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
TSR1-203ENST00000575049 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 PJA1Q8NG27 643 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 TIFAQ96CG3 184 aa6.15□□□□□ -1.42
TSR1-203ENST00000575049 EXOC2Q96KP1 924 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms