RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 FMNL1O95466 1100 aaPredicted RBP8.41□□□□□ -1.06
RPA1-207ENST00000574049 SCG2P13521 617 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 TERF2Q15554 542 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 TMTC3Q6ZXV5 915 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 DPH6Q7L8W6 267 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 CCDC150Q8NCX0 1101 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 KIAA1524Q8TCG1 905 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 ZKSCAN4Q969J2 545 aaPredicted RBP8.41□□□□□ -1.06
RPA1-207ENST00000574049 WRNIP1Q96S55 665 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 ZNF341Q9BYN7 854 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 IRX2Q9BZI1 471 aaPredicted RBP8.41□□□□□ -1.06
RPA1-207ENST00000574049 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 PICK1Q9NRD5 415 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
RPA1-207ENST00000574049 SWAP70Q9UH65 585 aa8.41□□□□□ -1.06
RPA1-207ENST00000574049 SMCO2A6NFE2 343 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 SPDYE3A6NKU9 549 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 TMEM110-MUSTN1A8MSY1 372 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 F5H6K3 240 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 KIF2AO00139 706 aaPredicted RBP8.4□□□□□ -1.06
RPA1-207ENST00000574049 PCP11498 1178 aaKnown RBP8.4□□□□□ -1.06
RPA1-207ENST00000574049 SHMT1P34896 483 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CYP4A11Q02928 519 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 KLRC3Q07444 240 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 SPP2Q13103 211 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 GRIPAP1Q4V328 841 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 LRRC8AQ8IWT6 810 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 AGBL3Q8NEM8 1001 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CCDC17Q96LX7 622 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CCDC42Q96M95 316 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 FOXN1O15353 648 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 DDAH1O94760 285 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 NEFHP12036 1026 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 INPP5BP32019 993 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 AMPD3Q01432 767 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 NCBP1Q09161 790 aaKnown RBP8.4□□□□□ -1.06
RPA1-207ENST00000574049 DGKZQ13574 1117 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 KCTD19Q17RG1 926 aaPredicted RBP8.4□□□□□ -1.06
RPA1-207ENST00000574049 RCSD1Q6JBY9 416 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 SH3BP5LQ7L8J4 393 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CSGALNACT2Q8N6G5 542 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CSRNP2Q9H175 543 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 PLSCR2Q9NRY7 297 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 PPME1Q9Y570 386 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 SLX4Q8IY92 1834 aa8.4□□□□□ -1.06
RPA1-207ENST00000574049 CALML3P27482 149 aa8.4□□□□□ -1.07
RPA1-207ENST00000574049 CDR1P51861 262 aa8.4□□□□□ -1.07
RPA1-207ENST00000574049 KIF23Q02241 960 aaPredicted RBP8.4□□□□□ -1.07
RPA1-207ENST00000574049 RESTQ13127 1097 aa8.4□□□□□ -1.07
RPA1-207ENST00000574049 FAM83BQ5T0W9 1011 aa8.4□□□□□ -1.07
RPA1-207ENST00000574049 LUC7L2Q9Y383 392 aaKnown RBP8.4□□□□□ -1.07
RPA1-207ENST00000574049 NEMFO60524 1076 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 TBCAO75347 108 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 CAVIN2O95810 425 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 CCDC175P0C221 793 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 HOXD11P31277 338 aaPredicted RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 DDIT3P35638 169 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 KRT26Q7Z3Y9 468 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 ERO1AQ96HE7 468 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 TRIM31Q9BZY9 425 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 GINS2Q9Y248 185 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 ZHX2Q9Y6X8 837 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 TAF1LQ8IZX4 1826 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 DDX60Q8IY21 1712 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 MYO5AQ9Y4I1 1855 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.075e-7■■□□□ 12.8
RPA1-207ENST00000574049 PAFAH1B1P43034 410 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 UBE2SQ16763 222 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 CCDC122Q5T0U0 273 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 NCAPH2Q6IBW4 605 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 MAATS1Q7Z4T9 603 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 TCHPQ9BT92 498 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 AGXT2Q9BYV1 514 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 GLIS2Q9BZE0 524 aaPredicted RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 SLC39A2Q9NP94 309 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 SAMSN1Q9NSI8 373 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 LRWD1Q9UFC0 647 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 MYH13Q9UKX3 1938 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 LY75O60449 1722 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 USO1O60763 962 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 LRRC41Q15345 812 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 LINC00301Q8NCQ3 95 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 NOC4LQ9BVI4 516 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 LUC7LQ9NQ29 371 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 FBXO28Q9NVF7 368 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
RPA1-207ENST00000574049 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
RPA1-207ENST00000574049 CUTAO60888 179 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms