RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 MSCO60682 206 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CTNND1O60716 968 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 DEAF1O75398 565 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 TCEA3O75764 348 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SOD2P04179 222 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CKMP06732 381 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 THBDP07204 575 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ASGR2P07307 311 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 EPXP11678 715 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ADH5P11766 374 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 HSPA6P17066 643 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CD53P19397 219 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 LTBRP36941 435 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PPM1FP49593 454 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 DNM2P50570 870 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SCAND1P57086 179 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ZNF280AP59817 542 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 KRT85P78386 507 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 IRX6P78412 446 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 ST5P78524 1137 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 RBM10P98175 930 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 ADCY1Q08828 1119 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SNW1Q13573 536 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 GAS6Q14393 721 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ACAP2Q15057 778 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CLUL1Q15846 466 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ARHGAP44Q17R89 818 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 TMEM95Q3KNT9 176 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 WDR78Q5VTH9 848 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 BROXQ5VW32 411 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CWF19L1Q69YN2 538 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 IQCEQ6IPM2 695 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ERAP2Q6P179 960 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 C1orf228Q6PIY5 440 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CLEC4GQ6UXB4 293 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 LBX2Q6XYB7 198 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SLCO4C1Q6ZQN7 724 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 TOGARAM2Q6ZUX3 1019 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 OVCH1Q7RTY7 1134 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 AMOTL1Q8IY63 956 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SMAP1Q8IYB5 467 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 CMTR2Q8IYT2 770 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 NME8Q8N427 588 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 C2orf69Q8N8R5 385 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 SMG8Q8ND04 991 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 SLC35G2Q8TBE7 412 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 FRS2Q8WU20 508 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 COPS5Q92905 334 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 TNIP3Q96KP6 325 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 TRIM47Q96LD4 638 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 MIPEPQ99797 713 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 RNF208Q9H0X6 261 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ASCC2Q9H1I8 757 aaPredicted RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 SUGCTQ9HAC7 445 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PLCB1Q9NQ66 1216 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 CASS4Q9NQ75 786 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 DDX21Q9NR30 783 aaKnown RBP eCLIP2.63□□□□□ -1.99
CHD3-217ENST00000574022 CHST7Q9NS84 486 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 C1orf112Q9NSG2 853 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 OXSMQ9NWU1 459 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 DDX20Q9UHI6 824 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 INVSQ9Y283 1065 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA9Q9Y5G4 932 aaKnown RBP2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA8Q9Y5G5 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA7Q9Y5G6 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA6Q9Y5G7 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA3Q9Y5H0 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 PCDHGA2Q9Y5H1 932 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 NPFFR2Q9Y5X5 522 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 ST14Q9Y5Y6 855 aa2.63□□□□□ -1.99
CHD3-217ENST00000574022 IGF1RP08069 1367 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CCDC66A2RUB6 948 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 FAM47E-STBD1D6RA91 191 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 H0Y8X5 98 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 STXBP3O00186 592 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 ARNTLO00327 626 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 NRG2O14511 850 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 AURKAO14965 403 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 PMM2O15305 246 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 TGM5O43548 720 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SIGLEC6O43699 453 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 LRRN2O75325 713 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SLITRK5O94991 958 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 GSNP06396 782 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SNRPBP14678 240 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 CYP7A1P22680 504 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 AKAP5P24588 427 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 GRK2P25098 689 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SERPINB3P29508 390 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 NOP2P46087 812 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 TRAPPC10P48553 1259 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 SEPHS1P49903 392 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 MECP2P51608 486 aaKnown RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 AK2P54819 239 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 HTRA3P83110 453 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 FOXD4Q12950 439 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 CHAF1AQ13111 956 aaPredicted RBP2.62□□□□□ -1.99
CHD3-217ENST00000574022 MMRN1Q13201 1228 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 LRRC32Q14392 662 aa2.62□□□□□ -1.99
CHD3-217ENST00000574022 CRY1Q16526 586 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms