RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
PRPF8-208ENST00000573716 PTGISQ16647 500 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 TSHZ3Q63HK5 1081 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 NFRKBQ6P4R8 1299 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 GJD3Q8N144 294 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 CCDC155Q8N6L0 562 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 MORC4Q8TE76 937 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 COPS5Q92905 334 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 NAPBQ9H115 298 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
PRPF8-208ENST00000573716 TSPY2A6NKD2 308 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 PATL2C9JE40 543 aaKnown RBP14.42□□□□□ -0.1
PRPF8-208ENST00000573716 NMT2O60551 498 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 KPNA6O60684 536 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 PLA2G6O60733 806 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 ICAM1P05362 532 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 MS4A1P11836 297 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 SLC16A2P36021 539 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 DEFB103AP81534 67 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 ZBTB40Q9NUA8 1239 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
PRPF8-208ENST00000573716 PRR33A8MZF0 331 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 ZFYP08048 801 aaPredicted RBP14.41□□□□□ -0.1
PRPF8-208ENST00000573716 PTPN11Q06124 597 aaPredicted RBP14.41□□□□□ -0.1
PRPF8-208ENST00000573716 PPARAQ07869 468 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 TTBK2Q6IQ55 1244 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 SCFD2Q8WU76 684 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 TGS1Q96RS0 853 aaKnown RBP14.41□□□□□ -0.1
PRPF8-208ENST00000573716 MPHOSPH6Q99547 160 aaKnown RBP14.41□□□□□ -0.1
PRPF8-208ENST00000573716 SUGCTQ9HAC7 445 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 LMCD1Q9NZU5 365 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 SIP14410 1827 aa14.41□□□□□ -0.1
PRPF8-208ENST00000573716 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 NKRFO15226 690 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 IL9P15248 144 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 MRE11P49959 708 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 CTDSPL2Q05D32 466 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 PTCRAQ6ISU1 281 aaPredicted RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 EP400NLQ6ZTU2 488 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 LRRC8DQ7L1W4 858 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 AFAP1L1Q8TED9 768 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 SEC62Q99442 399 aaKnown RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
PRPF8-208ENST00000573716 FRMPD2Q68DX3 1309 aaPredicted RBP14.4□□□□□ -0.1
PRPF8-208ENST00000573716 LINC01553A4QN01 128 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 A6NJR5 290 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 RANBP6O60518 1105 aaKnown RBP14.39□□□□□ -0.11
PRPF8-208ENST00000573716 SELPP16109 830 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 LEXMQ3ZCV2 418 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
PRPF8-208ENST00000573716 CNKSR3Q6P9H4 555 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 RNF207Q6ZRF8 634 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.39□□□□□ -0.11
PRPF8-208ENST00000573716 CAGE1Q8TC20 777 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 RAD9AQ99638 391 aa14.39□□□□□ -0.11
PRPF8-208ENST00000573716 RANBP17Q9H2T7 1088 aaKnown RBP14.39□□□□□ -0.11
PRPF8-208ENST00000573716 ALADP13716 330 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 ERVK-21P61565 698 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 FBXO22Q8NEZ5 403 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 DCAF4Q8WV16 495 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 IL17RBQ9NRM6 502 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 TOMM22Q9NS69 142 aa14.38□□□□□ -0.11
PRPF8-208ENST00000573716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.37□□□□□ -0.11
PRPF8-208ENST00000573716 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
PRPF8-208ENST00000573716 H3BQ06 376 aaPredicted RBP14.37□□□□□ -0.11
PRPF8-208ENST00000573716 GJB5O95377 273 aa14.37□□□□□ -0.11
PRPF8-208ENST00000573716 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
PRPF8-208ENST00000573716 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
PRPF8-208ENST00000573716 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
PRPF8-208ENST00000573716 ABHD14A-ACY1A0A1B0GW23 586 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 B4DLN1 442 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 NBNO60934 754 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 ARIH2O95376 493 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
PRPF8-208ENST00000573716 RPS6P62753 249 aaKnown RBP14.36□□□□□ -0.11
PRPF8-208ENST00000573716 NHLH1Q02575 133 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 IKBKEQ14164 716 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 GPNMBQ14956 572 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 CLEC4DQ8WXI8 215 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
PRPF8-208ENST00000573716 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 FSD1Q9BTV5 496 aa14.36□□□□□ -0.11
PRPF8-208ENST00000573716 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
PRPF8-208ENST00000573716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRPF8-208ENST00000573716 GRXCR2A6NFK2 248 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 DCXO43602 365 aa14.35□□□□□ -0.11
PRPF8-208ENST00000573716 GH1P01241 217 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms