RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 TRIB2Q92519 343 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.65
NDE1-208ENST00000573694 PIGSQ96S52 555 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 MAF1Q9H063 256 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 PNMA2Q9UL42 364 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 PCDHA7Q9UN72 937 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 A0A1W2PRG0 241 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 NR1I2O75469 434 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 CNMDO75829 334 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 FCER1AP12319 257 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
NDE1-208ENST00000573694 ATP2B1P20020 1258 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 CYP2B6P20813 491 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 MARCKSP29966 332 aaPredicted RBP10.95□□□□□ -0.66
NDE1-208ENST00000573694 ME1P48163 572 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 KCTD1Q719H9 257 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 RIOX2Q8IUF8 465 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 FSIP1Q8NA03 581 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 PRPF38AQ8NAV1 312 aaKnown RBP10.95□□□□□ -0.66
NDE1-208ENST00000573694 ARRDC4Q8NCT1 418 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 RASGRP4Q8TDF6 673 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 KCNG4Q8TDN1 519 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 PAGR1Q9BTK6 254 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 PORCNQ9H237 461 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 RIOX1Q9H6W3 641 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 VAT1LQ9HCJ6 419 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 ISY1Q9ULR0 285 aaKnown RBP10.95□□□□□ -0.66
NDE1-208ENST00000573694 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
NDE1-208ENST00000573694 H0YGN5 161 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 RAD21O60216 631 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 FLOT1O75955 427 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 NDUFB10O96000 172 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 COL6A1P12109 1028 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 SLC16A2P36021 539 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 CACNB2Q08289 660 aaPredicted RBP10.94□□□□□ -0.66
NDE1-208ENST00000573694 SLC39A14Q15043 492 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
NDE1-208ENST00000573694 SLFN13Q68D06 897 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 LRSAM1Q6UWE0 723 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 DPP9Q86TI2 863 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 GMCL1P1Q8NEA9 526 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 DCAF4Q8WV16 495 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 RRP36Q96EU6 259 aaKnown RBP10.94□□□□□ -0.66
NDE1-208ENST00000573694 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
NDE1-208ENST00000573694 MOV10L1Q9BXT6 1211 aaKnown RBP10.94□□□□□ -0.66
NDE1-208ENST00000573694 NUP62CLQ9H1M0 184 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 PRO3102Q9H379 93 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 BRMS1Q9HCU9 246 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 BTBD7Q9P203 1132 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 FBXO40Q9UH90 709 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 PPP1R9AQ9ULJ8 1098 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 MRVI1Q9Y6F6 885 aa10.94□□□□□ -0.66
NDE1-208ENST00000573694 ZNF236Q9UL36 1845 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 SMARCA1P28370 1054 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 NAPAP54920 295 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 RILPL1Q5EBL4 403 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 C1orf53Q5VUE5 145 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 LHX8Q68G74 356 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 PIK3AP1Q6ZUJ8 805 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 BLIDQ8IZY5 108 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 DAGLBQ8NCG7 672 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 CCDC148Q8NFR7 591 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 MRPS27Q92552 414 aaKnown RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 PAWRQ96IZ0 340 aaKnown RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 CLSTN2Q9H4D0 955 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 C11orf49Q9H6J7 331 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 DDX19AQ9NUU7 478 aaKnown RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
NDE1-208ENST00000573694 FEM1BQ9UK73 627 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 PCDHA4Q9UN74 947 aa10.93□□□□□ -0.66
NDE1-208ENST00000573694 LOC102724159A0A0B4J2E5 919 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 A0A1B0GVL5 298 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 A0A1W2PQ27 194 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 A0A1W2PQ64 194 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 A0A1W2PQD8 194 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 M0R2N6 131 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 DNM1LO00429 736 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 VWA5AO00534 786 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 ERCC3P19447 782 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 CALML3P27482 149 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 ADORA2AP29274 412 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 STAT3P40763 770 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 SLC1A4P43007 532 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 GRIN1Q05586 938 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 KCTD2Q14681 263 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 PWP2Q15269 919 aaKnown RBP10.92□□□□□ -0.66
NDE1-208ENST00000573694 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
NDE1-208ENST00000573694 CAMK4Q16566 473 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 TKFCQ3LXA3 575 aa10.92□□□□□ -0.66
NDE1-208ENST00000573694 TTC38Q5R3I4 469 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms