RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 RUFY4Q6ZNE9 571 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 FAM124AQ86V42 546 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 FAM26EQ8N5C1 309 aa5.63□□□□□ -1.51
ERCC4-204ENST00000573018 DDX3XO00571 662 aaKnown RBP eCLIP5.62□□□□□ -1.51
ERCC4-204ENST00000573018 CYR61O00622 381 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 AURKAO14965 403 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 CBFA2T2O43439 604 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 ITGAEP38570 1179 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 CRB2Q5IJ48 1285 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 FAM26FQ5R3K3 315 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 FBXW10Q5XX13 1052 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 CD300LDQ6UXZ3 194 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 TRAIPQ9BWF2 469 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 VPS11Q9H270 941 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 TSC22D4Q9Y3Q8 395 aa5.62□□□□□ -1.51
ERCC4-204ENST00000573018 FUCA1P04066 466 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 SEPHS1P49903 392 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 TCEAL1Q15170 157 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 ETV3LQ6ZN32 361 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 KIAA0825Q8IV33 1275 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 PALM2Q8IXS6 379 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
ERCC4-204ENST00000573018 KYQ8NBH2 561 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 TXNDC5Q8NBS9 432 aaKnown RBP5.61□□□□□ -1.51
ERCC4-204ENST00000573018 FERD3LQ96RJ6 166 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 TM9SF2Q99805 663 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 SPON2Q9BUD6 331 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 ZNF747Q9BV97 191 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 SLITRK6Q9H5Y7 841 aa5.61□□□□□ -1.51
ERCC4-204ENST00000573018 DIS3Q9Y2L1 958 aaKnown RBP5.61□□□□□ -1.51
ERCC4-204ENST00000573018 FZD7O75084 574 aa5.6□□□□□ -1.51
ERCC4-204ENST00000573018 AMHP03971 560 aa5.6□□□□□ -1.51
ERCC4-204ENST00000573018 ZNF585AQ6P3V2 769 aa5.6□□□□□ -1.51
ERCC4-204ENST00000573018 KLC2Q9H0B6 622 aa5.6□□□□□ -1.51
ERCC4-204ENST00000573018 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
ERCC4-204ENST00000573018 A0A087WZG4 1122 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 C2orf71A6NGG8 1288 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 LAMTOR5O43504 91 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 B4GALT3O60512 393 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 IMPDH2P12268 514 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 ITGA1P56199 1179 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 USP51Q70EK9 711 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 RNF34Q969K3 372 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.51
ERCC4-204ENST00000573018 ZNF214Q9UL59 606 aaPredicted RBP5.59□□□□□ -1.51
ERCC4-204ENST00000573018 BACE2Q9Y5Z0 518 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 HS3ST3A1Q9Y663 406 aa5.59□□□□□ -1.51
ERCC4-204ENST00000573018 NPHP3-ACAD11A0A0J9YXS1 232 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 C7orf72A4D263 438 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 PAMP19021 973 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 ADAT2Q7Z6V5 191 aaKnown RBP5.58□□□□□ -1.52
ERCC4-204ENST00000573018 TTLL6Q8N841 843 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 HAUS7Q99871 368 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
ERCC4-204ENST00000573018 MARCH2Q9P0N8 246 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 WHRNQ9P202 907 aa5.58□□□□□ -1.52
ERCC4-204ENST00000573018 LTBP3Q9NS15 1303 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 NPHS1O60500 1241 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 KLF10Q13118 480 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 PRR31Q5SQ13 230 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 DCP2Q8IU60 420 aaKnown RBP5.57□□□□□ -1.52
ERCC4-204ENST00000573018 FGD4Q96M96 766 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 PCED1AQ9H1Q7 454 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 PCDH18Q9HCL0 1135 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 CD248Q9HCU0 757 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 ING1Q9UK53 422 aaPredicted RBP5.57□□□□□ -1.52
ERCC4-204ENST00000573018 PPT2Q9UMR5 302 aa5.57□□□□□ -1.52
ERCC4-204ENST00000573018 GPR42O15529 346 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 SGSM2O43147 1006 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 CYP1A1P04798 512 aaPredicted RBP5.56□□□□□ -1.52
ERCC4-204ENST00000573018 STAT5AP42229 794 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 AMPD2Q01433 879 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 PRAMEF18Q5VWM3 479 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 HEATR6Q6AI08 1181 aaKnown RBP5.56□□□□□ -1.52
ERCC4-204ENST00000573018 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
ERCC4-204ENST00000573018 PLEKHO2Q8TD55 490 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 CDK5RAP1Q96SZ6 601 aaKnown RBP5.56□□□□□ -1.52
ERCC4-204ENST00000573018 AP5M1Q9H0R1 490 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 GBP3Q9H0R5 595 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 DEF6Q9H4E7 631 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 CLEC1BQ9P126 229 aa5.56□□□□□ -1.52
ERCC4-204ENST00000573018 CGGBP1Q9UFW8 167 aaPredicted RBP5.56□□□□□ -1.52
ERCC4-204ENST00000573018 SURF1Q15526 300 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 CIR1Q86X95 450 aaPredicted RBP5.55□□□□□ -1.52
ERCC4-204ENST00000573018 MIB1Q86YT6 1006 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 IGDCC4Q8TDY8 1250 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 ZSWIM3Q96MP5 696 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 KLHL25Q9H0H3 589 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 JADE2Q9NQC1 790 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 PCDHB10Q9UN67 800 aa5.55□□□□□ -1.52
ERCC4-204ENST00000573018 EPHX1P07099 455 aa5.54□□□□□ -1.52
ERCC4-204ENST00000573018 PLEKHH3Q7Z736 793 aa5.54□□□□□ -1.52
ERCC4-204ENST00000573018 TEX2Q8IWB9 1127 aa5.54□□□□□ -1.52
ERCC4-204ENST00000573018 DPF3Q92784 378 aa5.54□□□□□ -1.52
ERCC4-204ENST00000573018 PTPN18Q99952 460 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms