RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 PPP2R5BQ15173 497 aa15.58■□□□□ 0.08
CCDC40-208ENST00000572270 NSMFQ6X4W1 530 aa15.58■□□□□ 0.08
CCDC40-208ENST00000572270 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
CCDC40-208ENST00000572270 MORC4Q8TE76 937 aa15.58■□□□□ 0.08
CCDC40-208ENST00000572270 ARPP21Q9UBL0 812 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-208ENST00000572270 ADD3Q9UEY8 706 aaKnown RBP15.58■□□□□ 0.08
CCDC40-208ENST00000572270 PLXNA3P51805 1871 aa15.58■□□□□ 0.08
CCDC40-208ENST00000572270 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 RASA1P20936 1047 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 LTBRP36941 435 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 ID4P47928 161 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 ZXDAP98168 799 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 CTR9Q6PD62 1173 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 FAM160B2Q86V87 743 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-208ENST00000572270 CHURC1Q8WUH1 139 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 SYNPO2Q9UMS6 1093 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 SLC4A4Q9Y6R1 1079 aa15.57■□□□□ 0.08
CCDC40-208ENST00000572270 MICAL3Q7RTP6 2002 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 DCHS1Q96JQ0 3298 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 A6NJR5 290 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 IPO8O15397 1037 aaKnown RBP15.56■□□□□ 0.08
CCDC40-208ENST00000572270 CKBP12277 381 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 ALDH5A1P51649 535 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-208ENST00000572270 HTRA4P83105 476 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-208ENST00000572270 RBL2Q08999 1139 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 TCTN1Q2MV58 587 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 GDF6Q6KF10 455 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-208ENST00000572270 TMEM192Q8IY95 271 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 LRRC47Q8N1G4 583 aaKnown RBP15.56■□□□□ 0.08
CCDC40-208ENST00000572270 GMCL1P1Q8NEA9 526 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 YME1L1Q96TA2 773 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 RALGAPA2Q2PPJ7 1873 aa15.56■□□□□ 0.08
CCDC40-208ENST00000572270 ZBED9Q6R2W3 1325 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 RBM47A0AV96 593 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 PROB1E7EW31 1015 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 H0Y858 1186 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 ADD2P35612 726 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 RARSP54136 660 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 VCPP55072 806 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 CTC1Q2NKJ3 1217 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 MUM1L1Q5H9M0 696 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 ASCL5Q7RTU5 278 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 FBXO11Q86XK2 927 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 ERC1Q8IUD2 1116 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 MKL1Q969V6 931 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 PURBQ96QR8 312 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 MPHOSPH6Q99547 160 aaKnown RBP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC40-208ENST00000572270 TLR9Q9NR96 1032 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 CD207Q9UJ71 328 aa15.55■□□□□ 0.08
CCDC40-208ENST00000572270 KDM4AO75164 1064 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 TTLL1O95922 423 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 TRIM27P14373 513 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 AVPR2P30518 371 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 DLX2Q07687 328 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-208ENST00000572270 SIGLEC14Q08ET2 396 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 SESTD1Q86VW0 696 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 SCFD2Q8WU76 684 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 STAG1Q8WVM7 1258 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
CCDC40-208ENST00000572270 FSD1Q9BTV5 496 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
CCDC40-208ENST00000572270 CCPG1Q9ULG6 757 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 TRPC6Q9Y210 931 aa15.54■□□□□ 0.08
CCDC40-208ENST00000572270 ATG2AQ2TAZ0 1938 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 PTPRZ1P23471 2315 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-208ENST00000572270 PRR23AA6NEV1 266 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 LGR5O75473 907 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 PDE4BQ07343 736 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 HYAL1Q12794 435 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 SLFNL1Q499Z3 407 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-208ENST00000572270 CLUAP1Q96AJ1 413 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 CEP95Q96GE4 821 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 CTAGE1Q96RT6 745 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 C1orf115Q9H7X2 142 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 MTMR4Q9NYA4 1195 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 COL4A6Q14031 1691 aa15.53■□□□□ 0.08
CCDC40-208ENST00000572270 EMSYQ7Z589 1322 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 SLC1A4P43007 532 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 NUBP1P53384 320 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 PDE4DQ08499 809 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-208ENST00000572270 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-208ENST00000572270 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
CCDC40-208ENST00000572270 COPS5Q92905 334 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 LMAN2LQ9H0V9 348 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.08
CCDC40-208ENST00000572270 MYH7P12883 1935 aa15.52■□□□□ 0.07
CCDC40-208ENST00000572270 PTPDC1A2A3K4 754 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 MINDY4BA8MYZ0 360 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 TBX10O75333 385 aa15.51■□□□□ 0.07
CCDC40-208ENST00000572270 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms