RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 RMDN3Q96TC7 470 aa23.43■■□□□ 1.34
PKD1-237ENST00000569983 SH2B2O14492 632 aaPredicted RBP23.42■■□□□ 1.34
PKD1-237ENST00000569983 CYTH3O43739 400 aa23.42■■□□□ 1.34
PKD1-237ENST00000569983 CDK7P50613 346 aa23.42■■□□□ 1.34
PKD1-237ENST00000569983 TMTC2Q8N394 836 aa23.42■■□□□ 1.34
PKD1-237ENST00000569983 CTCFLQ8NI51 663 aaPredicted RBP23.42■■□□□ 1.34
PKD1-237ENST00000569983 MAP3K14Q99558 947 aa23.42■■□□□ 1.34
PKD1-237ENST00000569983 MYL10Q9BUA6 226 aa23.42■■□□□ 1.34
PKD1-237ENST00000569983 BAZ2BQ9UIF8 2168 aaKnown RBP23.42■■□□□ 1.34
PKD1-237ENST00000569983 CCDC69A6NI79 296 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 OPLAHO14841 1288 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 NKRFO15226 690 aaKnown RBP eCLIP23.41■■□□□ 1.34
PKD1-237ENST00000569983 RAG1P15918 1043 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 KIF5BP33176 963 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 HSD17B4P51659 736 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 ARHGEF16Q5VV41 709 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 OR6J1Q8NGC5 347 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 IWS1Q96ST2 819 aa23.41■■□□□ 1.34
PKD1-237ENST00000569983 PNMA6FA0A0J9YX94 578 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 EIF2AK2P19525 551 aaKnown RBP23.4■■□□□ 1.34
PKD1-237ENST00000569983 ITGB8P26012 769 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 CPT1AP50416 773 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 GHRHRQ02643 423 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 COL9A3Q14050 684 aaPredicted RBP23.4■■□□□ 1.34
PKD1-237ENST00000569983 TTLL4Q14679 1199 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 STXBP2Q15833 593 aa23.4■■□□□ 1.34
PKD1-237ENST00000569983 MAP3K20Q9NYL2 800 aaKnown RBP23.4■■□□□ 1.34
PKD1-237ENST00000569983 TLR3O15455 904 aaKnown RBP23.39■■□□□ 1.33
PKD1-237ENST00000569983 TXNP10599 105 aaKnown RBP23.39■■□□□ 1.33
PKD1-237ENST00000569983 LIFRP42702 1097 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 ITGA7Q13683 1181 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 BRDTQ58F21 947 aaPredicted RBP23.39■■□□□ 1.33
PKD1-237ENST00000569983 FAM126BQ8IXS8 530 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 PIBF1Q8WXW3 757 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 PXMP2Q9NR77 195 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 POLR3EQ9NVU0 708 aa23.39■■□□□ 1.33
PKD1-237ENST00000569983 GNAQP50148 359 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 SEPT14Q6ZU15 432 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 SAMD3Q8N6K7 520 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 COPS5Q92905 334 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 LZTS2Q9BRK4 669 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 SPZ1Q9BXG8 430 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 LRRC2Q9BYS8 371 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
PKD1-237ENST00000569983 ARIH2O95376 493 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 CALM1P0DP23 149 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 CALM2P0DP24 149 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 CALM3P0DP25 149 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 HOXA13P31271 388 aaPredicted RBP23.37■■□□□ 1.33
PKD1-237ENST00000569983 SLC43A3Q8NBI5 491 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 RRP36Q96EU6 259 aaKnown RBP23.37■■□□□ 1.33
PKD1-237ENST00000569983 NEK1Q96PY6 1258 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 SEZ6LQ9BYH1 1024 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 SLC12A7Q9Y666 1083 aa23.37■■□□□ 1.33
PKD1-237ENST00000569983 GCOM1H8Y6P7 765 aaPredicted RBP23.36■■□□□ 1.33
PKD1-237ENST00000569983 EIF3JO75822 258 aaKnown RBP23.36■■□□□ 1.33
PKD1-237ENST00000569983 TIMP1P01033 207 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 NR3C2P08235 984 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 MYL3P08590 195 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 POLR2MP0CAP2 368 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 SMARCA1P28370 1054 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 PSMC6P62333 389 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 SHHQ15465 462 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 CCDC62Q6P9F0 684 aa23.36■■□□□ 1.33
PKD1-237ENST00000569983 GRIN2DO15399 1336 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 RXRAP19793 462 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 PURAQ00577 322 aaKnown RBP23.35■■□□□ 1.33
PKD1-237ENST00000569983 FPGSQ05932 587 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 C9orf50Q5SZB4 431 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 GPR153Q6NV75 609 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 PDCD2LQ9BRP1 358 aa23.35■■□□□ 1.33
PKD1-237ENST00000569983 MTG1Q9BT17 334 aaPredicted RBP23.35■■□□□ 1.33
PKD1-237ENST00000569983 SEC63Q9UGP8 760 aaKnown RBP23.35■■□□□ 1.33
PKD1-237ENST00000569983 A6NJR5 290 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 KPNA6O60684 536 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 PLEKHA8P1O95397 391 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 CD4P01730 458 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 KRT32Q14532 448 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 TSGA10IPQ3SY00 556 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 SGMS1Q86VZ5 419 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 FCHSD1Q86WN1 690 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 RAB11FIP4Q86YS3 637 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 RASEFQ8IZ41 740 aa23.34■■□□□ 1.33
PKD1-237ENST00000569983 GH1P01241 217 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 MYCLP12524 364 aaPredicted RBP23.33■■□□□ 1.33
PKD1-237ENST00000569983 LY6KQ17RY6 165 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 MFSD5Q6N075 450 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 SYNE3Q6ZMZ3 975 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 DHX32Q7L7V1 743 aaKnown RBP23.33■■□□□ 1.33
PKD1-237ENST00000569983 MICU3Q86XE3 530 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 SRBD1Q8N5C6 995 aaKnown RBP23.33■■□□□ 1.33
PKD1-237ENST00000569983 PPP1R12CQ9BZL4 782 aa23.33■■□□□ 1.33
PKD1-237ENST00000569983 KIAA1217Q5T5P2 1943 aa23.33■■□□□ 1.32
PKD1-237ENST00000569983 EPHB4P54760 987 aa23.32■■□□□ 1.32
PKD1-237ENST00000569983 PGM5Q15124 567 aa23.32■■□□□ 1.32
PKD1-237ENST00000569983 CMTR1Q8N1G2 835 aaKnown RBP23.32■■□□□ 1.32
PKD1-237ENST00000569983 FANCBQ8NB91 859 aa23.32■■□□□ 1.32
PKD1-237ENST00000569983 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
PKD1-237ENST00000569983 B4GALT4O60513 344 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 EXOSC10Q01780 885 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms