RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 Q9Y3F1 56 aa15.1■□□□□ 0.01
CNOT1-220ENST00000569916 B4DLN1 442 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 EPB41L2O43491 1005 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 CPA1P15085 419 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 MRPL12P52815 198 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 CMTR1Q8N1G2 835 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 SAMD3Q8N6K7 520 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 FANCBQ8NB91 859 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 JAKMIP1Q96N16 626 aaKnown RBP15.09■□□□□ 0.01
CNOT1-220ENST00000569916 RMDN3Q96TC7 470 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 WDR11Q9BZH6 1224 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 STARD7Q9NQZ5 370 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 PXMP2Q9NR77 195 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
CNOT1-220ENST00000569916 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
CNOT1-220ENST00000569916 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
CNOT1-220ENST00000569916 MAGEA10P43363 369 aaPredicted RBP15.08■□□□□ 0
CNOT1-220ENST00000569916 FSCN1Q16658 493 aaKnown RBP15.08■□□□□ 0
CNOT1-220ENST00000569916 ARHGEF16Q5VV41 709 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 SCFD2Q8WU76 684 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 GLT1D1Q96MS3 346 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 IWS1Q96ST2 819 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 AP5M1Q9H0R1 490 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 PDLIM7Q9NR12 457 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
CNOT1-220ENST00000569916 ELP1O95163 1332 aa15.08■□□□□ 0
CNOT1-220ENST00000569916 ARIH2O95376 493 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 TLE2Q04725 743 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 PPP2R5BQ15173 497 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 STXBP2Q15833 593 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 SYNE3Q6ZMZ3 975 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 CNTNAP5Q8WYK1 1306 aa15.07■□□□□ 0
CNOT1-220ENST00000569916 MYH7BA7E2Y1 1941 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 KLF18A0A0U1RQI7 1052 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 GCOM1H8Y6P7 765 aaPredicted RBP15.06■□□□□ 0
CNOT1-220ENST00000569916 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 0
CNOT1-220ENST00000569916 ZBTB43O43298 467 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 NR3C2P08235 984 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 POLR2MP0CAP2 368 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 BMP8BP34820 402 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 CCDC62Q6P9F0 684 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 CXCL17Q6UXB2 119 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 ANKRD33Q7Z3H0 272 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 COPS5Q92905 334 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 PDCD2LQ9BRP1 358 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 USP26Q9BXU7 913 aa15.06■□□□□ 0
CNOT1-220ENST00000569916 RBM28Q9NW13 759 aaKnown RBP15.06■□□□□ 0
CNOT1-220ENST00000569916 SCN10AQ9Y5Y9 1956 aa15.05■□□□□ 0
CNOT1-220ENST00000569916 TRIOBPQ9H2D6 2365 aa15.05■□□□□ 0
CNOT1-220ENST00000569916 RANBP2P49792 3224 aaKnown RBP15.05■□□□□ -0
CNOT1-220ENST00000569916 A0A0U1RQG5 324 aaPredicted RBP15.05■□□□□ -0
CNOT1-220ENST00000569916 A0A1W2PPC1 479 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 hCG_1642624A0A1W2PR95 340 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 GOLGA8AA7E2F4 631 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 GOLGA8BA8MQT2 603 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 PQBP1O60828 265 aaKnown RBP15.05■□□□□ -0
CNOT1-220ENST00000569916 CLTBP09497 229 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 TXNP10599 105 aaKnown RBP15.05■□□□□ -0
CNOT1-220ENST00000569916 RPS6KB1P23443 525 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 CDK7P50613 346 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 RCAN1P53805 252 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 FUT2Q10981 343 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 TTLL4Q14679 1199 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 PGM5Q15124 567 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 RTN1Q16799 776 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 SEPT14Q6ZU15 432 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 Q6ZUG5 572 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 SH3RF1Q7Z6J0 888 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 OR6J1Q8NGC5 347 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 IL31RAQ8NI17 732 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 AGXT2Q9BYV1 514 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 PRDM5Q9NQX1 630 aaPredicted RBP15.05■□□□□ -0
CNOT1-220ENST00000569916 PRKAG2Q9UGJ0 569 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 FRMPD4Q14CM0 1322 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 NID2Q14112 1375 aa15.05■□□□□ -0
CNOT1-220ENST00000569916 DOCK5Q9H7D0 1870 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 MROH7Q68CQ1 1323 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 TRIM43BA6NCK2 446 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 ARVCFO00192 962 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 ZEB2O60315 1214 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 EIF3JO75822 258 aaKnown RBP15.04■□□□□ -0
CNOT1-220ENST00000569916 CABYRO75952 493 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
CNOT1-220ENST00000569916 PSMA5P28066 241 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 FXR1P51114 621 aaKnown RBP eCLIP15.04■□□□□ -0
CNOT1-220ENST00000569916 FGD1P98174 961 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
CNOT1-220ENST00000569916 APOBRQ0VD83 1088 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 FCHSD1Q86WN1 690 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 FBXL16Q8N461 479 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 BRF1Q92994 677 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 TRIM43Q96BQ3 446 aaPredicted RBP15.04■□□□□ -0
CNOT1-220ENST00000569916 TOX2Q96NM4 488 aa15.04■□□□□ -0
CNOT1-220ENST00000569916 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms