RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 ZMYM1Q5SVZ6 1142 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 CASC1Q6TDU7 716 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 CWC27Q6UX04 472 aaKnown RBP5.7□□□□□ -1.5
CNOT1-219ENST00000569882 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 C16orf86Q6ZW13 317 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 TAS1R3Q7RTX0 852 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 IFNL3Q8IZI9 196 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 GPRC5AQ8NFJ5 357 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 LPAR1Q92633 364 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 GTPBP3Q969Y2 492 aaKnown RBP5.7□□□□□ -1.5
CNOT1-219ENST00000569882 POM121Q96HA1 1249 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 SEC62Q99442 399 aaKnown RBP5.7□□□□□ -1.5
CNOT1-219ENST00000569882 ARHGAP39Q9C0H5 1083 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 KIAA1683Q9H0B3 1180 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 RPAP3Q9H6T3 665 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-219ENST00000569882 TIMMDC1Q9NPL8 285 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 HOXC10Q9NYD6 342 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 STAP2Q9UGK3 403 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 STX8Q9UNK0 236 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 PTCH2Q9Y6C5 1203 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 CCDC171Q6TFL3 1326 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 ZSWIM8A7E2V4 1837 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 PIK3CDO00329 1044 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 ZNF213O14771 459 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 WDR46O15213 610 aaKnown RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 THBS1P07996 1170 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 EEF2P13639 858 aaKnown RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SDSP20132 328 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 MAPK4P31152 587 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 HAND2P61296 217 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 PRKCZQ05513 592 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 TRDNQ13061 729 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 NMIQ13287 307 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 CCDC96Q2M329 555 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SBK1Q52WX2 424 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 LYPD4Q6UWN0 246 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 C17orf99Q6UX52 265 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 MFSD6Q6ZSS7 791 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 METTL16Q86W50 562 aaKnown RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 PLEKHM2Q8IWE5 1019 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 ACER1Q8TDN7 264 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SH3TC2Q8TF17 1288 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SOCS4Q8WXH5 440 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 CHMP4CQ96CF2 233 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 FAM227BQ96M60 508 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 ZSCAN10Q96SZ4 725 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 RNF41Q9H4P4 317 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-219ENST00000569882 GPAMQ9HCL2 828 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 CLIP2Q9UDT6 1046 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 SRRDQ9UH36 339 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 CTNNA3Q9UI47 895 aa5.69□□□□□ -1.5
CNOT1-219ENST00000569882 KIAA0100Q14667 2235 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 A0A0D9SFI3 127 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 ADCY3O60266 1144 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 TTLL1O95922 423 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 PROCP04070 461 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 BCRP11274 1271 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 ZKSCAN1P17029 563 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 CYP2B6P20813 491 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 RASA1P20936 1047 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 CDK11BP21127 795 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 HOXA7P31268 230 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 RGS2P41220 211 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 FLT3LGP49771 235 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 ERVK-24P63145 666 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 JAG1P78504 1218 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 TFAP4Q01664 338 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 SRSF11Q05519 484 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 GABPAQ06546 454 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 PDE4CQ08493 712 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 USP4Q13107 963 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 MOGSQ13724 837 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 COG2Q14746 738 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 IMMTQ16891 758 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 FAM47AQ5JRC9 791 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 FAM83BQ5T0W9 1011 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 TTC22Q5TAA0 569 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 CENPQQ7L2Z9 268 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 DPP9Q86TI2 863 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 NCAPG2Q86XI2 1143 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 TICAM2Q86XR7 235 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 MB21D1Q8N884 522 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 P2RX7Q99572 595 aaKnown RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 VCPKMTQ9H867 229 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-219ENST00000569882 RABGAP1Q9Y3P9 1069 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 DOCK3Q8IZD9 2030 aa5.68□□□□□ -1.5
CNOT1-219ENST00000569882 ROBO3Q96MS0 1386 aa5.67□□□□□ -1.5
CNOT1-219ENST00000569882 ERICH2A1L162 156 aa5.67□□□□□ -1.5
CNOT1-219ENST00000569882 DHX16O60231 1041 aaKnown RBP5.67□□□□□ -1.5
CNOT1-219ENST00000569882 ZBED4O75132 1171 aa5.67□□□□□ -1.5
CNOT1-219ENST00000569882 F11P03951 625 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms