RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 GMCL1P1Q8NEA9 526 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 TBCKQ8TEA7 893 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 ZNF622Q969S3 477 aaKnown RBP eCLIP6.43□□□□□ -1.38
CDH13-213ENST00000569454 ERO1AQ96HE7 468 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 CDK5RAP3Q96JB5 506 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 PIGSQ96S52 555 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 C7orf25Q9BPX7 421 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 NT5C3AQ9H0P0 336 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 THAP9Q9H5L6 903 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 EXOC1Q9NV70 894 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 INTS13Q9NVM9 706 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 STK32BQ9NY57 414 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 TMOD2Q9NZR1 351 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 MAGEC2Q9UBF1 373 aaPredicted RBP6.43□□□□□ -1.38
CDH13-213ENST00000569454 HERC5Q9UII4 1024 aaKnown RBP6.43□□□□□ -1.38
CDH13-213ENST00000569454 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 ABCB11O95342 1321 aa6.43□□□□□ -1.38
CDH13-213ENST00000569454 PVALEFA0A1B0GWK0 134 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 MPHOSPH10O00566 681 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 MFAP3LO75121 409 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 KIF20AO95235 890 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 SLU7O95391 586 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 FOSP01100 380 aaPredicted RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 CCDC175P0C221 793 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 GOLGA8HP0CJ92 632 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 CHRM1P11229 460 aaPredicted RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 PLCG1P19174 1290 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 FECHP22830 423 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 PBX1P40424 430 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 CLK2P49760 499 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 USP11P51784 963 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 TUBB4BP68371 445 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 PSMD2Q13200 908 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 TUBB2AQ13885 445 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 ARID5BQ14865 1188 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 KARSQ15046 597 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 IL17AQ16552 155 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 CERKLQ49MI3 558 aaPredicted RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 NOM1Q5C9Z4 860 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 TCP11X2Q5H9J9 407 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 KRT79Q5XKE5 535 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 TATDN1Q6P1N9 297 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 SLFN12Q8IYM2 578 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 ADSSL1Q8N142 457 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 LRRC47Q8N1G4 583 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 RETREG2Q8NC44 543 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 RASGRP4Q8TDF6 673 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 NELFBQ8WX92 580 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 DPF2Q92785 391 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 MTMR9Q96QG7 549 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 TUBB2BQ9BVA1 445 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 COL25A1Q9BXS0 654 aaPredicted RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 TRIM9Q9C026 710 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 TMEM60Q9H2L4 133 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 L2HGDHQ9H9P8 463 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 DDX4Q9NQI0 724 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 SAMSN1Q9NSI8 373 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 CGNQ9P2M7 1197 aaKnown RBP6.42□□□□□ -1.38
CDH13-213ENST00000569454 LRWD1Q9UFC0 647 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 RAPGEFL1Q9UHV5 662 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 MTMR7Q9Y216 660 aa6.42□□□□□ -1.38
CDH13-213ENST00000569454 BAHCC1Q9P281 2608 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 LGALS16A8MUM7 142 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 KCNJ18B7U540 433 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TMEM232C9JQI7 657 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 N4BP3O15049 544 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TBX3O15119 743 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 VEGFAP15692 232 aaPredicted RBP6.41□□□□□ -1.38
CDH13-213ENST00000569454 CCNE1P24864 410 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 SLC1A4P43007 532 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TNNI2P48788 182 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 CTCFP49711 727 aaPredicted RBP6.41□□□□□ -1.38
CDH13-213ENST00000569454 DNM2P50570 870 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 SCNN1DP51172 638 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 COPB1P53618 953 aaKnown RBP6.41□□□□□ -1.38
CDH13-213ENST00000569454 ASIC1P78348 528 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 ICA1Q05084 483 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 LRRC63Q05C16 580 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 KRT31Q15323 416 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 SLC15A2Q16348 729 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TSR1Q2NL82 804 aaKnown RBP6.41□□□□□ -1.38
CDH13-213ENST00000569454 CCDC93Q567U6 631 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 HAUS3Q68CZ6 603 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 ARHGAP27Q6ZUM4 889 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 UNC13DQ70J99 1090 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 SV2BQ7L1I2 683 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 APTXQ7Z2E3 356 aaKnown RBP6.41□□□□□ -1.38
CDH13-213ENST00000569454 SLC51AQ86UW1 340 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TMTC1Q8IUR5 882 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TMEM139Q8IV31 216 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 RTKN2Q8IZC4 609 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 ADGRF4Q8IZF3 695 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 TC2NQ8N9U0 490 aa6.41□□□□□ -1.38
CDH13-213ENST00000569454 ERMNQ8TAM6 284 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms