RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SCAMP3	O14828	347 aa	Known RBP	5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	SMARCA5	O60264	1052 aa	Predicted RBP	5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	TBC1D8	O95759	1140 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	GSTM1	P09488	218 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	ITGA4	P13612	1032 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	TACR1	P25103	407 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	POU4F1	Q01851	419 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	TCEAL1	Q15170	157 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	SPDYA	Q5MJ70	313 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	FAM124A	Q86V42	546 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	JAML	Q86YT9	394 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	NAT16	Q8N8M0	369 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	C19orf47	Q8N9M1	422 aa	Known RBP	5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	RGS22	Q8NE09	1264 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	PPP4R1L	Q9P1A2	415 aa		5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	WDR33	Q9C0J8	1336 aa	Known RBP	5.93	□□□□□ -1.46
UBR1-209	ENST00000569243	ZBTB7C	A1YPR0	619 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF394	Q53GI3	561 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	DCAF15	Q66K64	600 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	PPFIBP1	Q86W92	1011 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF654	Q8IZM8	581 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	OR6P1	Q8NGX9	317 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	PHAX	Q9H814	394 aa	Known RBP	5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	RXFP1	Q9HBX9	757 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243	PDLIM7	Q9NR12	457 aa		5.92	□□□□□ -1.46
UBR1-209	ENST00000569243		H0Y8X5	98 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	LAMTOR5	O43504	91 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	SOX9	P48436	509 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	NANOS3	P60323	173 aa	Known RBP	5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	RACK1	P63244	317 aa	Known RBP	5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	EEF1DP3	Q658K8	133 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	FIBCD1	Q8N539	461 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	RASGRP4	Q8TDF6	673 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	PTCHD1	Q96NR3	888 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	FCRL3	Q96P31	734 aa	Predicted RBP	5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	CRBN	Q96SW2	442 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	WHRN	Q9P202	907 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	PPT2	Q9UMR5	302 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	ZNF451	Q9Y4E5	1061 aa		5.91	□□□□□ -1.46
UBR1-209	ENST00000569243	ZYX	Q15942	572 aa	Known RBP	5.9	□□□□□ -1.46
UBR1-209	ENST00000569243	MCTP2	Q6DN12	878 aa		5.9	□□□□□ -1.46
UBR1-209	ENST00000569243	RCSD1	Q6JBY9	416 aa		5.9	□□□□□ -1.46
UBR1-209	ENST00000569243	DDX11	Q96FC9	970 aa		5.9	□□□□□ -1.46
UBR1-209	ENST00000569243	PCDHGB7	Q9Y5F8	929 aa		5.9	□□□□□ -1.46
UBR1-209	ENST00000569243	NPEPPSL1	A6NEC2	478 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	GPR42	O15529	346 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	L1CAM	P32004	1257 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	GIPR	P48546	466 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	FAM26F	Q5R3K3	315 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	TDRD10	Q5VZ19	366 aa	Known RBP	5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	FBXW10	Q5XX13	1052 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	BRF1	Q92994	677 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	CEP89	Q96ST8	783 aa		5.89	□□□□□ -1.47
UBR1-209	ENST00000569243	PCSK5	Q92824	1860 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	FAM86C2P	A6NEL3	165 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	MUSK	O15146	869 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	CBFA2T2	O43439	604 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	TP53	P04637	393 aa	Predicted RBP	5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	EIF6	P56537	245 aa	Known RBP	5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	R3HDM1	Q15032	1099 aa	Known RBP	5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	RUFY4	Q6ZNE9	571 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	DNER	Q8NFT8	737 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	RCC1L	Q96I51	464 aa	Known RBP	5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	HAUS7	Q99871	368 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	GBP3	Q9H0R5	595 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	IKZF4	Q9H2S9	585 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	TCAF1	Q9Y4C2	921 aa		5.88	□□□□□ -1.47
UBR1-209	ENST00000569243	TRBV23OR9-2	A0A075B6M9	112 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	PPM1B	O75688	479 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	RPL13	P26373	211 aa	Known RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	SELENOP	P49908	381 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	PURA	Q00577	322 aa	Known RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	CACNB2	Q08289	660 aa	Predicted RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	PAK2	Q13177	524 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	GRB10	Q13322	594 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	C9orf131	Q5VYM1	1079 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	HEATR6	Q6AI08	1181 aa	Known RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	METTL16	Q86W50	562 aa	Known RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	CIR1	Q86X95	450 aa	Predicted RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	LINC00482	Q8N8I6	264 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	CPA5	Q8WXQ8	436 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	KLHL25	Q9H0H3	589 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	NOL6	Q9H6R4	1146 aa	Known RBP	5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	GINM1	Q9NU53	330 aa		5.87	□□□□□ -1.47
UBR1-209	ENST00000569243	AURKA	O14965	403 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	LMO1	P25800	156 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	GJA8	P48165	433 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	MFAP1	P55081	439 aa	Known RBP	5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	CASP7	P55210	303 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	SLC7A5	Q01650	507 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	TRIM26	Q12899	539 aa	Predicted RBP	5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	SURF1	Q15526	300 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	GNPTAB	Q3T906	1256 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	ARHGEF39	Q8N4T4	335 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	TXNDC5	Q8NBS9	432 aa	Known RBP	5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	IGDCC4	Q8TDY8	1250 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	GPRASP2	Q96D09	838 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	TSPAN17	Q96FV3	270 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243	WWC2-AS2	Q96NR7	200 aa		5.86	□□□□□ -1.47
UBR1-209	ENST00000569243		A0A1W2PQH9	124 aa		5.85	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms