RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 TDHQ8IZJ6 230 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 CTCFLQ8NI51 663 aaPredicted RBP29.33■■■□□ 2.29
CCNF-205ENST00000569093 BADQ92934 168 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 NEK1Q96PY6 1258 aa29.33■■■□□ 2.29
CCNF-205ENST00000569093 EIF2AK2P19525 551 aaKnown RBP29.32■■■□□ 2.28
CCNF-205ENST00000569093 HOXA13P31271 388 aaPredicted RBP29.32■■■□□ 2.28
CCNF-205ENST00000569093 LIFRP42702 1097 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 ADCK5Q3MIX3 580 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 ARHGEF16Q5VV41 709 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 COPS5Q92905 334 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 SZT2Q5T011 3432 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 LAMA3Q16787 3333 aa29.32■■■□□ 2.28
CCNF-205ENST00000569093 A0A0U1RQG5 324 aaPredicted RBP29.31■■■□□ 2.28
CCNF-205ENST00000569093 DCDC2CA8MYV0 355 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 ARVCFO00192 962 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 PLEKHA8P1O95397 391 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 KIF5BP33176 963 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 GHRHRQ02643 423 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 CMTR1Q8N1G2 835 aaKnown RBP29.31■■■□□ 2.28
CCNF-205ENST00000569093 SCFD2Q8WU76 684 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 TCEANC2Q96MN5 208 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 TOX2Q96NM4 488 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 TMEM39AQ9NV64 488 aa29.31■■■□□ 2.28
CCNF-205ENST00000569093 ARIH2O95376 493 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 TXNP10599 105 aaKnown RBP29.3■■■□□ 2.28
CCNF-205ENST00000569093 EXOSC10Q01780 885 aaKnown RBP29.3■■■□□ 2.28
CCNF-205ENST00000569093 PPP2R5BQ15173 497 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 SEPT14Q6ZU15 432 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 OR6J1Q8NGC5 347 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 LRCH3Q96II8 777 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 IWS1Q96ST2 819 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 PXMP2Q9NR77 195 aa29.3■■■□□ 2.28
CCNF-205ENST00000569093 KIAA0355O15063 1070 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 ZEB2O60315 1214 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 STXBP2Q15833 593 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 TSGA10IPQ3SY00 556 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 SRBD1Q8N5C6 995 aaKnown RBP29.29■■■□□ 2.28
CCNF-205ENST00000569093 SPZ1Q9BXG8 430 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 SLC12A7Q9Y666 1083 aa29.29■■■□□ 2.28
CCNF-205ENST00000569093 GRIN2DO15399 1336 aa29.28■■■□□ 2.28
CCNF-205ENST00000569093 NR3C2P08235 984 aa29.28■■■□□ 2.28
CCNF-205ENST00000569093 PSMC6P62333 389 aa29.28■■■□□ 2.28
CCNF-205ENST00000569093 TRAF1Q13077 416 aa29.28■■■□□ 2.28
CCNF-205ENST00000569093 KIAA1217Q5T5P2 1943 aa29.28■■■□□ 2.28
CCNF-205ENST00000569093 CABYRO75952 493 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 RAG1P15918 1043 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 ITGA7Q13683 1181 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 TTLL4Q14679 1199 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 CCDC62Q6P9F0 684 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 DHX32Q7L7V1 743 aaKnown RBP29.27■■■□□ 2.28
CCNF-205ENST00000569093 SGMS1Q86VZ5 419 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 RRP36Q96EU6 259 aaKnown RBP29.27■■■□□ 2.28
CCNF-205ENST00000569093 LZTS2Q9BRK4 669 aa29.27■■■□□ 2.28
CCNF-205ENST00000569093 MAP3K20Q9NYL2 800 aaKnown RBP29.27■■■□□ 2.28
CCNF-205ENST00000569093 GCOM1H8Y6P7 765 aaPredicted RBP29.26■■■□□ 2.27
CCNF-205ENST00000569093 NKRFO15226 690 aaKnown RBP eCLIP29.26■■■□□ 2.27
CCNF-205ENST00000569093 POLR2MP0CAP2 368 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 CALM1P0DP23 149 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 CALM2P0DP24 149 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 CALM3P0DP25 149 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 SMARCA1P28370 1054 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 GNAQP50148 359 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 FAM126BQ8IXS8 530 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 FANCBQ8NB91 859 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 SLC43A3Q8NBI5 491 aa29.26■■■□□ 2.27
CCNF-205ENST00000569093 MROH7Q68CQ1 1323 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 MYL3P08590 195 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 CPT1AP50416 773 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 LY6KQ17RY6 165 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 FCHSD1Q86WN1 690 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 CCDC82Q8N4S0 544 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 SAMD3Q8N6K7 520 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 PDCD2LQ9BRP1 358 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 PPP4R2Q9NY27 417 aa29.25■■■□□ 2.27
CCNF-205ENST00000569093 hCG_1642624A0A1W2PR95 340 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 EIF3JO75822 258 aaKnown RBP29.24■■■□□ 2.27
CCNF-205ENST00000569093 MYCLP12524 364 aaPredicted RBP29.24■■■□□ 2.27
CCNF-205ENST00000569093 KRT32Q14532 448 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 LRIT3Q3SXY7 679 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 MICU3Q86XE3 530 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 ZFP91Q96JP5 570 aaPredicted RBP29.24■■■□□ 2.27
CCNF-205ENST00000569093 TBX21Q9UL17 535 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 BRPF3Q9ULD4 1205 aa29.24■■■□□ 2.27
CCNF-205ENST00000569093 CPA1P15085 419 aa29.23■■■□□ 2.27
CCNF-205ENST00000569093 PURAQ00577 322 aaKnown RBP29.23■■■□□ 2.27
CCNF-205ENST00000569093 SHHQ15465 462 aa29.23■■■□□ 2.27
CCNF-205ENST00000569093 IL31RAQ8NI17 732 aa29.23■■■□□ 2.27
CCNF-205ENST00000569093 KCNB2Q92953 911 aa29.23■■■□□ 2.27
CCNF-205ENST00000569093 POLR3EQ9NVU0 708 aa29.23■■■□□ 2.27
CCNF-205ENST00000569093 A6NJR5 290 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 HSPA4P34932 840 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 PGM5Q15124 567 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 C9orf50Q5SZB4 431 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 APOA5Q6Q788 366 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 SYNE3Q6ZMZ3 975 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 SEC63Q9UGP8 760 aaKnown RBP29.22■■■□□ 2.27
CCNF-205ENST00000569093 SNX14Q9Y5W7 946 aa29.22■■■□□ 2.27
CCNF-205ENST00000569093 TLR3O15455 904 aaKnown RBP29.21■■■□□ 2.27
CCNF-205ENST00000569093 TIMP1P01033 207 aa29.21■■■□□ 2.27
CCNF-205ENST00000569093 CD4P01730 458 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms