RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 COPS5Q92905 334 aa14.17□□□□□ -0.14
FANCA-232ENST00000568983 C1QTNF1Q9BXJ1 281 aa14.17□□□□□ -0.14
FANCA-232ENST00000568983 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
FANCA-232ENST00000568983 XIRP2A4UGR9 3374 aa14.17□□□□□ -0.14
FANCA-232ENST00000568983 RBM47A0AV96 593 aaKnown RBP14.16□□□□□ -0.14
FANCA-232ENST00000568983 A6NJR5 290 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 TLL1O43897 1013 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 IQCF3P0C7M6 154 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
FANCA-232ENST00000568983 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 PTGISQ16647 500 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 PHOSPHO2Q8TCD6 241 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 CLEC4DQ8WXI8 215 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 VWCEQ96DN2 955 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 ZBED2Q9BTP6 218 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 MTCH2Q9Y6C9 303 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 COL4A4P53420 1690 aaPredicted RBP14.16□□□□□ -0.14
FANCA-232ENST00000568983 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
FANCA-232ENST00000568983 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 A0A0D9SFI3 127 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 BAIAP3O94812 1187 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 FGAP02671 866 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 NOVP48745 357 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 ALX1Q15699 326 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 FAM122AQ96E09 287 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 FAM227BQ96M60 508 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 TCP11L1Q9NUJ3 509 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 COG5Q9UP83 839 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 PCDHB15Q9Y5E8 787 aa14.15□□□□□ -0.14
FANCA-232ENST00000568983 REV3LO60673 3130 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 EPOPA6NHQ4 379 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
FANCA-232ENST00000568983 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 BMP1P13497 986 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 EDNRBP24530 442 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 TAP1Q03518 808 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 MCMDC2Q4G0Z9 681 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 GPATCH4Q5T3I0 446 aaKnown RBP14.14□□□□□ -0.15
FANCA-232ENST00000568983 KRT40Q6A162 431 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 SEPT14Q6ZU15 432 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 AFAP1L1Q8TED9 768 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 HLA-CQ95604 372 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
FANCA-232ENST00000568983 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
FANCA-232ENST00000568983 ARIH2O95376 493 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 GH1P01241 217 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 MMP3P08254 477 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 FGRP09769 529 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 HSPD1P10809 573 aaKnown RBP14.13□□□□□ -0.15
FANCA-232ENST00000568983 PLA2G5P39877 138 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
FANCA-232ENST00000568983 AFG1LQ8WV93 481 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 ESR2Q92731 530 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 TTC14Q96N46 770 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 CRBNQ96SW2 442 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 ZKSCAN3Q9BRR0 538 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 MTUS1Q9ULD2 1270 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 SALL3Q9BXA9 1300 aa14.13□□□□□ -0.15
FANCA-232ENST00000568983 PCP11498 1178 aaKnown RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 SELPP16109 830 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 POU3F3P20264 500 aaPredicted RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 PDE1AP54750 535 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 WDR5P61964 334 aaKnown RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 NMIQ13287 307 aaPredicted RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 GRB10Q13322 594 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 LY6KQ17RY6 165 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 LRRC8DQ7L1W4 858 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 C7orf31Q8N865 590 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 NSUN6Q8TEA1 469 aaKnown RBP14.12□□□□□ -0.15
FANCA-232ENST00000568983 GDPD5Q8WTR4 605 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 KAT14Q9H8E8 782 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 HCN4Q9Y3Q4 1203 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 TRANK1O15050 2925 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 ABCB11O95342 1321 aa14.12□□□□□ -0.15
FANCA-232ENST00000568983 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 ARHGEF15O94989 841 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 SNHG28P0DPA3 235 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 STXBP2Q15833 593 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 DGKDQ16760 1214 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 ARHGEF16Q5VV41 709 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 GDF6Q6KF10 455 aaPredicted RBP14.11□□□□□ -0.15
FANCA-232ENST00000568983 CNKSR3Q6P9H4 555 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 TMCO2Q7Z6W1 182 aaPredicted RBP14.11□□□□□ -0.15
FANCA-232ENST00000568983 IQCA1Q86XH1 822 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 MCF2L2Q86YR7 1114 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 TBC1D10CQ8IV04 446 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 PNMA1Q8ND90 353 aa14.11□□□□□ -0.15
FANCA-232ENST00000568983 RMDN3Q96TC7 470 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms